Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0296 ATGTCGTCATCTCTGATCGCGAATCCAACCGCGGATCGCTCGCGTGACTCTCACCGCACAAAGAAGAAGAAGAAATCTATTAAGCAACACCAACAGCAGCATGACGCGAAATGGAAAACCCACGCGCAGCAGCAGCTATACTCCTCCAAGCTCCACCAGGCCCTCGCGCGTGTCAACATCTCCGGCGACGCGCCACGCCGCGGCAGGGCGGTGCGCGATGCCGCCGACAGGGTGCTCGCCGTGGCCGCCAAGGGGAGGACGCGGTGGAGCCGCGCCATCTTAACGAACCGGCTGAAGCTCAAGTTCAGGAAGCCGGTTCACAAGAGGCAGAAGGTTGTTGTTGTTGGGCCGGGCCGGCCAAAGAAAAAGGCCCGGTTCAGCGTTCTCCGGCTCAGGGGGAAAACCTTACCCGCGGTTCAGAGGAAAGTTAGGGTTCTGGGCCGGTTGGTTCCCGGTTGCAGAAAAGAACCGCTTCCGGTGATTCTCGAAGAGGCCATCGATTACATACCCGCGCTCGAGATGCAGGTTCGCGCCATGCAAGCTCTCGCTGACTTACTCTTAGGCTCTTCCTCCGCCTCCACCTCCGCCACCGCCGCGCCGCCTAGTTGA 609 0.6059 MSSSLIANPTADRSRDSHRTKKKKKSIKQHQQQHDAKWKTHAQQQLYSSKLHQALARVNISGDAPRRGRAVRDAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPVHKRQKVVVVGPGRPKKKARFSVLRLRGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMQALADLLLGSSSASTSATAAPPS* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0296 202 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 11 198 IPR044660 GO:0006355
Gso9g0296 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 142 189 IPR036638 GO:0046983
Gso9g0296 202 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 11 198 - -
Gso9g0296 202 MobiDBLite consensus disorder prediction 1 37 - -
Gso9g0296 202 CDD bHLH_AtIBH1_like 128 183 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0296 Gso-Chr9 2843820 2845607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0296 36 201 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 51.913 1.25e-48 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0296 - - gmx:100786088 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1164 15 11408849 11410016 Gso9g0296 9 2843820 2845607 GST
Gso7g2012 7 44169422 44170540 Gso9g0296 9 2843820 2845607 PCT
Gso17g0290 17 2568866 2569871 Gso9g0296 9 2843820 2845607 PCT
Gso9g0296 9 2843820 2845607 Gso7g2012 7 44169422 44170540 PCT
Gso9g0296 9 2843820 2845607 Gso17g0290 17 2568866 2569871 PCT