Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso9g0257 | ATGTACTGCAGCAGCATAATCATGGACAATTACCAAGGTGATTTAACTGACATACTCCGAGCAAGTGGTGGAGCATATGGTAGCACAGGCACAGGCACAGGAACTTCATCATCTGATCAATTACATACCACATCTCATCATCATCATCATTCTTCTTCTCACATCACCCTCTCTCATAATGATCACTGGCACCACCACCAACACTTCTCTTCTTCTTCTTCTGATCCTCCCATCACTTTCTCATCTTCTTCTTCTGTGCTAATTCAAGACACAAACTTTGGTGATCCTTTCTCAACCATGAGAGATCCCTTCCTTCAGGAGCTTGACATGCCTTCAGCTTCTGCCTACTTCACTGGTGGTGCCTTGGAATTAGAAGCAGCTGCAACTTTTGGTTCTGTTACTAATAATACTACTAGTTCTACTACTGCTACTACTGTTTTTGCTACTGCACACAAGATTCTTGAGGAACATGACAACAACAACATGAGAAGGCCTTGCAAAAACATATTCTCAAACATGATTCAGATCTCTCCCAATGCAAAGTTACCAATCTCACCATATGATTCCACCAACACAGCCATGGCACCTTCTCCAAGGCCAATTAAGCCTCCTGCTTTGGTTTCACCCAACATGGTGATGAATGCAAACACCTCCAAGGAATGCCTTGTAGACACCACAGGAGTGCAGATCTCATCTCCACGGAATCCGGGTCTTAAAAGAAGGAAGAACCAGGCCAAAAAGGTTGTTTGTATTCCTGCACCAGCAGCTGCAAACAGCAGACAAACTGGAGAGGTAGTTCCGTCTGATTTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGTTCACCTTATCCCAGGGGTTATTACAGATGCAGTAGCTCAAAGGGTTGTTCTGCGAGGAAGCAAGTTGAGAGGAGCAGGAATGACCCAAACATGCTGGTTATCACATACACATCAGAGCACAACCATCCATGGCCAACACAAAGAAATGCTCTGGCTGGTTCAACAAGATCACAGCCATCCAAGAACAACAACAATGCTGCTGCTTCCAATTCAAAGAATTCAGAAGGCTCAAACTCCCAAAAGGGCACAGCAACAAAAGCAAAGGATGATGAAGAGAGCAACAATTATAACAATAGCAGTGAGGGCAATGTGTCCCCAGTTGTGGCTGGGAACTCATCAAACAGTGTGAAGGAAGAGAATATGGAAGACATAGAGAAACATCAGATTGAGATGGATGAGGGAGAGTTCAGTGATGGAATCCCTTATAAGCCTAGTTTGATGGATCATCAGAGTACTAATAACCAACAATCTGAGGACTTCTTTGCTGAGTTGGGAGAAATAGAAGCTGACCCTTTGGACCTTTTGTTCACACAAGGTTTTGGTGGTGCTGATGATCAAAGGGAATCCAAGGCCTTGGATCCATTTCATCTCTTTGACTGTCAGGGAGATAAAATTAGTAGAGTGAAAAAAAAGAAAAAGAAAGAGAGTGCTGGTTGA | 1506 | 0.4356 | MYCSSIIMDNYQGDLTDILRASGGAYGSTGTGTGTSSSDQLHTTSHHHHHSSSHITLSHNDHWHHHQHFSSSSSDPPITFSSSSSVLIQDTNFGDPFSTMRDPFLQELDMPSASAYFTGGALELEAAATFGSVTNNTTSSTTATTVFATAHKILEEHDNNNMRRPCKNIFSNMIQISPNAKLPISPYDSTNTAMAPSPRPIKPPALVSPNMVMNANTSKECLVDTTGVQISSPRNPGLKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRNDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNNNAAASNSKNSEGSNSQKGTATKAKDDEESNNYNNSSEGNVSPVVAGNSSNSVKEENMEDIEKHQIEMDEGEFSDGIPYKPSLMDHQSTNNQQSEDFFAELGEIEADPLDLLFTQGFGGADDQRESKALDPFHLFDCQGDKISRVKKKKKKESAG* | 502 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso9g0257 | 501 | Pfam | WRKY DNA -binding domain | 269 | 326 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso9g0257 | 501 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 12 | 486 | IPR044810 | GO:0003700 | |
Gso9g0257 | 501 | MobiDBLite | consensus disorder prediction | 320 | 404 | - | - | |
Gso9g0257 | 501 | MobiDBLite | consensus disorder prediction | 320 | 366 | - | - | |
Gso9g0257 | 501 | SMART | WRKY_cls | 267 | 327 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso9g0257 | 501 | MobiDBLite | consensus disorder prediction | 293 | 312 | - | - | |
Gso9g0257 | 501 | SUPERFAMILY | WRKY DNA-binding domain | 265 | 328 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso9g0257 | 501 | MobiDBLite | consensus disorder prediction | 379 | 400 | - | - | |
Gso9g0257 | 501 | PANTHER | WRKY TRANSCRIPTION FACTOR 14-RELATED | 12 | 486 | - | - | |
Gso9g0257 | 501 | MobiDBLite | consensus disorder prediction | 29 | 57 | - | - | |
Gso9g0257 | 501 | ProSiteProfiles | WRKY domain profile. | 262 | 328 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso9g0257 | 501 | Gene3D | WRKY domain | 241 | 321 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso9g0257 | Gso-Chr9 | 2434319 | 2438784 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso9g0257 | 8 | 486 | WRKY Transcription Factor Family | AT1G30650 | 39.679 | 2.21e-88 | 276 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Gso9g0257 | WRKY | 2e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso9g0257 | - | - | gmx:100805707 | 832.017 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso15g1135 | 15 | 10922594 | 10926899 | Gso9g0257 | 9 | 2434319 | 2438784 | GST |