Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0257 ATGTACTGCAGCAGCATAATCATGGACAATTACCAAGGTGATTTAACTGACATACTCCGAGCAAGTGGTGGAGCATATGGTAGCACAGGCACAGGCACAGGAACTTCATCATCTGATCAATTACATACCACATCTCATCATCATCATCATTCTTCTTCTCACATCACCCTCTCTCATAATGATCACTGGCACCACCACCAACACTTCTCTTCTTCTTCTTCTGATCCTCCCATCACTTTCTCATCTTCTTCTTCTGTGCTAATTCAAGACACAAACTTTGGTGATCCTTTCTCAACCATGAGAGATCCCTTCCTTCAGGAGCTTGACATGCCTTCAGCTTCTGCCTACTTCACTGGTGGTGCCTTGGAATTAGAAGCAGCTGCAACTTTTGGTTCTGTTACTAATAATACTACTAGTTCTACTACTGCTACTACTGTTTTTGCTACTGCACACAAGATTCTTGAGGAACATGACAACAACAACATGAGAAGGCCTTGCAAAAACATATTCTCAAACATGATTCAGATCTCTCCCAATGCAAAGTTACCAATCTCACCATATGATTCCACCAACACAGCCATGGCACCTTCTCCAAGGCCAATTAAGCCTCCTGCTTTGGTTTCACCCAACATGGTGATGAATGCAAACACCTCCAAGGAATGCCTTGTAGACACCACAGGAGTGCAGATCTCATCTCCACGGAATCCGGGTCTTAAAAGAAGGAAGAACCAGGCCAAAAAGGTTGTTTGTATTCCTGCACCAGCAGCTGCAAACAGCAGACAAACTGGAGAGGTAGTTCCGTCTGATTTGTGGGCTTGGAGAAAATATGGTCAGAAACCCATTAAAGGTTCACCTTATCCCAGGGGTTATTACAGATGCAGTAGCTCAAAGGGTTGTTCTGCGAGGAAGCAAGTTGAGAGGAGCAGGAATGACCCAAACATGCTGGTTATCACATACACATCAGAGCACAACCATCCATGGCCAACACAAAGAAATGCTCTGGCTGGTTCAACAAGATCACAGCCATCCAAGAACAACAACAATGCTGCTGCTTCCAATTCAAAGAATTCAGAAGGCTCAAACTCCCAAAAGGGCACAGCAACAAAAGCAAAGGATGATGAAGAGAGCAACAATTATAACAATAGCAGTGAGGGCAATGTGTCCCCAGTTGTGGCTGGGAACTCATCAAACAGTGTGAAGGAAGAGAATATGGAAGACATAGAGAAACATCAGATTGAGATGGATGAGGGAGAGTTCAGTGATGGAATCCCTTATAAGCCTAGTTTGATGGATCATCAGAGTACTAATAACCAACAATCTGAGGACTTCTTTGCTGAGTTGGGAGAAATAGAAGCTGACCCTTTGGACCTTTTGTTCACACAAGGTTTTGGTGGTGCTGATGATCAAAGGGAATCCAAGGCCTTGGATCCATTTCATCTCTTTGACTGTCAGGGAGATAAAATTAGTAGAGTGAAAAAAAAGAAAAAGAAAGAGAGTGCTGGTTGA 1506 0.4356 MYCSSIIMDNYQGDLTDILRASGGAYGSTGTGTGTSSSDQLHTTSHHHHHSSSHITLSHNDHWHHHQHFSSSSSDPPITFSSSSSVLIQDTNFGDPFSTMRDPFLQELDMPSASAYFTGGALELEAAATFGSVTNNTTSSTTATTVFATAHKILEEHDNNNMRRPCKNIFSNMIQISPNAKLPISPYDSTNTAMAPSPRPIKPPALVSPNMVMNANTSKECLVDTTGVQISSPRNPGLKRRKNQAKKVVCIPAPAAANSRQTGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRNDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNNNAAASNSKNSEGSNSQKGTATKAKDDEESNNYNNSSEGNVSPVVAGNSSNSVKEENMEDIEKHQIEMDEGEFSDGIPYKPSLMDHQSTNNQQSEDFFAELGEIEADPLDLLFTQGFGGADDQRESKALDPFHLFDCQGDKISRVKKKKKKESAG* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0257 501 Pfam WRKY DNA -binding domain 269 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso9g0257 501 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 12 486 IPR044810 GO:0003700
Gso9g0257 501 MobiDBLite consensus disorder prediction 320 404 - -
Gso9g0257 501 MobiDBLite consensus disorder prediction 320 366 - -
Gso9g0257 501 SMART WRKY_cls 267 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso9g0257 501 MobiDBLite consensus disorder prediction 293 312 - -
Gso9g0257 501 SUPERFAMILY WRKY DNA-binding domain 265 328 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso9g0257 501 MobiDBLite consensus disorder prediction 379 400 - -
Gso9g0257 501 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 12 486 - -
Gso9g0257 501 MobiDBLite consensus disorder prediction 29 57 - -
Gso9g0257 501 ProSiteProfiles WRKY domain profile. 262 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso9g0257 501 Gene3D WRKY domain 241 321 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0257 Gso-Chr9 2434319 2438784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0257 8 486 WRKY Transcription Factor Family AT1G30650 39.679 2.21e-88 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso9g0257 WRKY 2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0257 - - gmx:100805707 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1135 15 10922594 10926899 Gso9g0257 9 2434319 2438784 GST