Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso9g0236 | ATGGTTCTGAAACGTGTTTATATGGTCATTTTGTTGATATGGTGCATATATCCATTAGAATCTGTAATACCGCCGCATCGGTATCGGAATCAGAATCAGACGATAGCACGACACGGTTGCAATCCAAAATGTGGAAATGTTTCTGTTTTTTTCCCTTTCGGAATGGACGATCCCAAATGCTATGCAAGCAAGCCGTTTGAAATAGAATGCAGACACAATAACAATACTTCTCAAGGTCATCGGAAACCCGTACCCTACCTCAAGTATATAAGTTTGGAGGTAATGTACATTGATATTCAAGACGGTACGGTTGGGATCAAGAATCCGATTTTCCATCTTGGTTGTGGCAAGACAATTACAGGCATAAATCTGGAAGGCAGTCCTTTCGTGTATTCCCAGAATTACAACTCATTTGTCGGCGTAGGTTGCCAAAACGCCGCCATATTGTCGTCAAACGACACGATACTTACAGCCTGTGTGTCGATGTGTTACGACGACCTCGAAAAAGGCAATGACATCGACATTTCGAGTTGTCGTGGCTCCTACTGCTGCGAGACTTCACTGCCGCCGTATCTTTCAGCATACAACATCTCAACTGAAACCGTGGAAGTGAAAAGTAATATCAAAGCAGAATGCTCAAATTACTTGCTGATTAGAGCAGAATATAGTAACTTCAAGTACGTGTACGATGAGTACAATTCCAGTTACTGGGTTCCCATTCTTGGGGACCTAAAGAAACAAAAAGATGTTCCTGCGGTGCTTGAATGGGAGATTCCGATTCACACGCCCAACAATTCCTTCCCTGAATTCCGTACAGATGGCAGCTACAACTGCAGTTACACTAATGTCACATCTTCACTATATTCACAATCGGGTTGGAGATGTTCTTGCAGAGATGGCTTCGAGGGAAATCCCTACATACAAGAAGGCTGTAAATTTGTAGCTACGGGGGATTCCGAGCTTCGAGACAAAAGGAAAACTCGAGAAAAGTGGGCCATAATAGGAGTTTCTTCAAGCCTCGGAACCATCATTTTACTCCTCGGTTTGTGGTGGTTGAACAAAGTTGTAAGGAAAAATATAGAAAAGAAACGCAAGGAAAAATTCTTCAAACAAAATGGAGGATTGTTGTTAAAACAAAGACTCTCTTCAGGAGAAGCCAATGTTGACAAAATTAAACTCTTTACTCTAAAGGACTTAGACAAGGCCACTGATCACTTTAATATAAATAGAGTACTAGGAAAGGGAGGCCAAGGTACCGTTTACAAAGGGATGCTAGTAGATGGAAATATTGTTGCAGTGAAAAAATTTAAGGTCAACGGAAATGTTGAAGAATTCATCAATGAATTTGTGATTCTTTCACAAATTAACCATAGAAATGTGGTTAAGTTGTTAGGATGTTGTTTGGAGACTGAAATCCCATTGCTTGTTTATGAATTCATTCCCAATGGTAACCTTTATGAATATTTACTTGGACAAAATGATGACTTACCAATGACATGGGATATGCGTTTGAGAATTGCCACTGAAGTTGCTGGAGCTCTATTTTACTTGCACTCAGCTGCTTCTCAACCCATTTATCACAGAGACATCAAGTCAAGAAATATACTATTGGATGGGAAGTATAAAGCAAAAGTAGCAGACTTTGGTGCATCAAGAATGGTTTCCATTGAAGCCACTCACCTCACTACTGCAGTTCAAGGAACTTTTGGATACATGGACCCTGAATATTTCCATACTAGTCAATTAACAGATAAAAGTGATGTCTACAGCTTTGGAGTGGTTCTTATTGAACTTTTAACTGGGAAAGAGCCAATATCTTCTGCAAAACAACAAGAGCTTAGAAGTTTGGCTTCATATTTCCTTCTCTGTATGGAGGAAAATCGTCTTTTTGATATTATTGATGAAAGAATCGTGAAGGAAGCGGAAAAAGAACACATTGTTGTTGTTGCCAATCTTGCAAGAAGATGCTTAGAGTTGAAAGGGAAAAGACGACCAACTATGAAAGAAGTCACATCAGAATTGGAAAGTATCCAAAAATCAAGAAAACAGTCTGCTTCACAAGAACAACATGATGCTGGAATTGATGAGTGCCAATTTTGGTCTGTGATTTCTCCAACTTCAAATTTGGGGGAAACTTCGGATAGCAAAGCATCAACCTTGGAGATTATGCCTACTCATCCTAATCATTGA | 2190 | 0.3973 | MVLKRVYMVILLIWCIYPLESVIPPHRYRNQNQTIARHGCNPKCGNVSVFFPFGMDDPKCYASKPFEIECRHNNNTSQGHRKPVPYLKYISLEVMYIDIQDGTVGIKNPIFHLGCGKTITGINLEGSPFVYSQNYNSFVGVGCQNAAILSSNDTILTACVSMCYDDLEKGNDIDISSCRGSYCCETSLPPYLSAYNISTETVEVKSNIKAECSNYLLIRAEYSNFKYVYDEYNSSYWVPILGDLKKQKDVPAVLEWEIPIHTPNNSFPEFRTDGSYNCSYTNVTSSLYSQSGWRCSCRDGFEGNPYIQEGCKFVATGDSELRDKRKTREKWAIIGVSSSLGTIILLLGLWWLNKVVRKNIEKKRKEKFFKQNGGLLLKQRLSSGEANVDKIKLFTLKDLDKATDHFNINRVLGKGGQGTVYKGMLVDGNIVAVKKFKVNGNVEEFINEFVILSQINHRNVVKLLGCCLETEIPLLVYEFIPNGNLYEYLLGQNDDLPMTWDMRLRIATEVAGALFYLHSAASQPIYHRDIKSRNILLDGKYKAKVADFGASRMVSIEATHLTTAVQGTFGYMDPEYFHTSQLTDKSDVYSFGVVLIELLTGKEPISSAKQQELRSLASYFLLCMEENRLFDIIDERIVKEAEKEHIVVVANLARRCLELKGKRRPTMKEVTSELESIQKSRKQSASQEQHDAGIDECQFWSVISPTSNLGETSDSKASTLEIMPTHPNH* | 730 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso9g0236 | 729 | CDD | STKc_IRAK | 412 | 677 | - | - | |
Gso9g0236 | 729 | Gene3D | Phosphorylase Kinase; domain 1 | 378 | 479 | - | - | |
Gso9g0236 | 729 | MobiDBLite | consensus disorder prediction | 708 | 729 | - | - | |
Gso9g0236 | 729 | PANTHER | WALL ASSOCIATED KINASE-LIKE PROTEIN | 29 | 716 | - | - | |
Gso9g0236 | 729 | MobiDBLite | consensus disorder prediction | 668 | 688 | - | - | |
Gso9g0236 | 729 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 29 | 716 | IPR045274 | GO:0007166 | |
Gso9g0236 | 729 | ProSiteProfiles | Protein kinase domain profile. | 406 | 677 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso9g0236 | 729 | Gene3D | Transferase(Phosphotransferase) domain 1 | 480 | 701 | - | - | |
Gso9g0236 | 729 | SUPERFAMILY | Protein kinase-like (PK-like) | 390 | 677 | IPR011009 | - | |
Gso9g0236 | 729 | SMART | serkin_6 | 406 | 677 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso9g0236 | 729 | Pfam | Wall-associated receptor kinase galacturonan-binding | 40 | 106 | IPR025287 | GO:0030247 | |
Gso9g0236 | 729 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 525 | 537 | IPR008271 | GO:0004672|GO:0006468 | |
Gso9g0236 | 729 | Pfam | Protein tyrosine and serine/threonine kinase | 407 | 674 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso9g0236 | Gso-Chr9 | 2225759 | 2232613 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso9g0236 | 3 | 690 | Receptor kinase-like Gene Family | AT1G16260 | 43.300 | 2.04e-177 | 522 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Gso9g0236 | PK_Tyr_Ser-Thr | 3.4e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso9g0236 | - | - | gmx:100799320 | 1361.67 |