Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0215 ATGAAGCCTTTTAGCCTTTTAGTGTTATCTTTATATTTCTTCTCTGTGGTAGGGCAGCTTCCCTCTCAGGACATTTTAACATTGCTGGAGTTTAAGAAAGGCATCAAGCATGACCCTACTGGTTATGTTCTCAATTCCTGGAATGAGGAATCCATTGACTTTGATGGATGCCCATCTTCATGGAATGGAGTTCTGTGCAATGGTGGTAATGTTGCTGGGGTTGTTCTTGACAACTTGGGTCTCTCTGCTGACACTGACTTGAGTGTGTTTACTAATCTCACAAAGCTTGTGAAACTCTCCTTGTCCAACAATTCCATATCAGGAACACTACTTGACAGCATTGCTGATTTCAAAAGCCTTGAATTCTTGGATATCTCTTATAACCTCTTTTCCTCATCCTTGCCATTGGGGATTGGTAAATTAGGGAGCTTGCAGAATCTGTCGTTGGCTGGAAATAACTTCTCTGGCCCAATTCCTGACTCTATTTCAGAAATGGCCTCCATCAAGTCCCTTGACTTGAGCTGCAATGCCTTCTCTGGAATGCTGCCAGCATCGTTGACTAAGACTATTAGTCTTGTATCTCTTAACTTGTCTCATAACGGCTTCAATGGAAAAATTCCCAAAGGTTTGGAGCTGATCCCTGCTCTTGAAAAACTTGACTTGCATGGGAATATGCTTGAAGGTAATTTGGATGTTGTATTTATGCTTTCATCAAGTGCCAGCTATGTTGATTTAAGTGAGAATATGCTGTCAAGTTCTGATTCCAATCAGAAGTTTCTACCGCGAATATCTGAAAGTATTAAGCATCTGAATCTAAGCCACAACAAGCTTACTGGGTCATTGGCTAGTGGAGCCGCGGAACCTGTTTTTGAAAACTTGAAGGTGTTGGACCTCAGCTACAATCAGTTGGACGGAGAATTGCCCGGATTTGATTTTGTTTATGATCTTGAAGTTCTTAAACTCAGCAACAACAGATTTTCAGGATTTATTCCTAATGGCCTGCTGAAAGGAGACTCTTTGGTTTTAACTGAATTGGATTTGAGTGCCAACAATCTCTCAGGGCCACTAAGTATAATTACATCAACAACACTTCATTCTCTTAATCTCTCATCAAATGAGTTCACGGGTGATATGCCACTGTTGACTGGAAGCTGTGCTGTACTTGATCTGTCAAATAACAAATTAGAAGGAAACTTGACCAGGATGTTGAAATGGGGGAATATAGAATTTCTTGATCTCAGTCGGAATCATTTGACGGGGGCCATCCCTGAGGAAACTCCTCAATTTCTGCGATTGAATTATTTGAACCTATCCCATAATTCTCTAAGCAGCTCCCTTCCAAAAGTCTTAACACAGTATCCAAAGCTTAGAGTGCTCGACATTAGTTTCAACCAATTGGATGGACTACTTCCAGCTAATCTGCTCACACTGCCCACATTGCAAGAGCTGCGTCTTGAAAATAATATGATCTCTGGTGGCATCAAGTTTTCGTCTTCTCCTGACCAATCCGATCTTCAGATTCTTGATCTTTCTCACAACCAGCTTAATGGCTATTTTCCTGATGAGTTTGGGTCATTAACTGGCCTAAAAGTGCTAAATATTGCCGGAAATAATTTTTCTGGTTCTCTTCCAACTACCATTGCAGACATGAGTTCACTTGACTCCCTGGATATATCAGAGAATCATTTTACTGGTCCTCTACCAAGTAACATGCCAAAGGGGCTCCAAAACTTTAATGCTTCACAAAATGATCTGTCTGGAGTTGTCCCAGAAGTTCTTAGAAAGTTTCCCAGTTCTTCTTTCTTTCCTGGGAATACCAAGTTACATTTTCCAAATGGTCCTCCTGGATCAATCAGTTCACCTGCTGAAAGTTCCAAGAGGAAGCATATGAACACCATAGTTAAAGTCATAATCATAGTGTCATGCGTGGTTGCGCTCTTCATATTAATCTTGCTTGCTGTCTTCATACACTACATACGTATATCAAGATCTCCACCAGAATATGAAACAAGTAAGGATATCCACAGGCATCCTCAACCAATTATCTCGGCTCCTGTTCGTACGACAGATGGGGGTGGCGCTTTGGTTGTTTCAGCTGAGGACCTCGTGACCTCACGCAAAGAGTCACCATCGGAGATAATCAGCTCTGATGAAAAAATGGCAGCTGTAACAGGGTTCTCTCCATCAAAACAAAGCCACTTTTCATGGTCACCAGAATCTGGTGATTCACTTAGTGGTGAAAATCTTGCAAGACTAGATACGAGATCGCCAGATCGGTTGGTTGGCGAGCTACATTTTCTTGATGATACGATAACATTGACGCCTGAGGAGCTCTCAAGGGCCCCTGCTGAAGTTTTAGGAAGAAGTAGTCACGGTACTTCTTACAAGGCAACTCTGGAGAATGGTTTGTTGTTGAGAGTGAAGTGGTTGAGAGAAGGAGTGGCAAAACAGAGAAAAGAATTTGTAAAGGAGACGAAGAAATTTGCAAACATCAGACATCCAAATGTTGTAGGATTGAGAGGATATTATTGGGGTCCTACACAGCACGAGAAGCTTATACTTTCAGATTACATCTCACTAGGAAGTCTTGCAAGTTTTCTTTATGATCGACCAGGAAGAAAAGGTCCACCACTAACTTGGACCCAGAGGCTCAAAATAGCAGTTGATGTAGCACGTGGCCTGAACTATCTCCATTTTGATCGCGCTGTTCCTCACGGGAATCTCAAAGCTACAAATGTGTTGTTAGATACAACTGATATGAATGCACGTGTTGCCGATTACTGCCTTCACCGACTCATGACTCAAGCTGGTACCATTGAACAGATTCTCGATGCTGGGGTCTTGGGTTATTGCGCACCAGAGTTAGCTGCTTCCAAGAAGCCAATGCCCTCCTTCAAGTCAGATGTTTATGCTTTTGGAGTGATACTTTTGGAACTTCTAACTGGAAGGTGTGCTGGTGATGTTATATCTAGTGAGGAGGGAGGTGTTGATCTGACAGACTGGGTAAGGTTGCGTGTAGCAGAAGGCCGAGGCTCAGAATGTTTTGAGGCTACCTTGATGCCGGAAATGAGCAATCCAGTTGTAGAAAAGGGAATGAAGGAGGTCCTGGGAATAGCAATGCGGTGCATTCGGTCCATTTCTGAAAGGCCTGGTATCAAGACTATTTATGAAGATCTCTCTTCTATATAG 3189 0.4243 MKPFSLLVLSLYFFSVVGQLPSQDILTLLEFKKGIKHDPTGYVLNSWNEESIDFDGCPSSWNGVLCNGGNVAGVVLDNLGLSADTDLSVFTNLTKLVKLSLSNNSISGTLLDSIADFKSLEFLDISYNLFSSSLPLGIGKLGSLQNLSLAGNNFSGPIPDSISEMASIKSLDLSCNAFSGMLPASLTKTISLVSLNLSHNGFNGKIPKGLELIPALEKLDLHGNMLEGNLDVVFMLSSSASYVDLSENMLSSSDSNQKFLPRISESIKHLNLSHNKLTGSLASGAAEPVFENLKVLDLSYNQLDGELPGFDFVYDLEVLKLSNNRFSGFIPNGLLKGDSLVLTELDLSANNLSGPLSIITSTTLHSLNLSSNEFTGDMPLLTGSCAVLDLSNNKLEGNLTRMLKWGNIEFLDLSRNHLTGAIPEETPQFLRLNYLNLSHNSLSSSLPKVLTQYPKLRVLDISFNQLDGLLPANLLTLPTLQELRLENNMISGGIKFSSSPDQSDLQILDLSHNQLNGYFPDEFGSLTGLKVLNIAGNNFSGSLPTTIADMSSLDSLDISENHFTGPLPSNMPKGLQNFNASQNDLSGVVPEVLRKFPSSSFFPGNTKLHFPNGPPGSISSPAESSKRKHMNTIVKVIIIVSCVVALFILILLAVFIHYIRISRSPPEYETSKDIHRHPQPIISAPVRTTDGGGALVVSAEDLVTSRKESPSEIISSDEKMAAVTGFSPSKQSHFSWSPESGDSLSGENLARLDTRSPDRLVGELHFLDDTITLTPEELSRAPAEVLGRSSHGTSYKATLENGLLLRVKWLREGVAKQRKEFVKETKKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISLGSLASFLYDRPGRKGPPLTWTQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTTDMNARVADYCLHRLMTQAGTIEQILDAGVLGYCAPELAASKKPMPSFKSDVYAFGVILLELLTGRCAGDVISSEEGGVDLTDWVRLRVAEGRGSECFEATLMPEMSNPVVEKGMKEVLGIAMRCIRSISERPGIKTIYEDLSSI* 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0215 1062 ProSiteProfiles Leucine-rich repeat profile. 292 314 IPR001611 GO:0005515
Gso9g0215 1062 Pfam Leucine rich repeat 143 201 IPR001611 GO:0005515
Gso9g0215 1062 Pfam Leucine rich repeat 411 466 IPR001611 GO:0005515
Gso9g0215 1062 Pfam Leucine rich repeat 505 563 IPR001611 GO:0005515
Gso9g0215 1062 Gene3D Phosphorylase Kinase; domain 1 771 857 - -
Gso9g0215 1062 Gene3D Transferase(Phosphotransferase) domain 1 859 1062 - -
Gso9g0215 1062 Gene3D Ribonuclease Inhibitor 264 621 IPR032675 -
Gso9g0215 1062 Gene3D Ribonuclease Inhibitor 24 188 IPR032675 -
Gso9g0215 1062 PANTHER - 6 1062 - -
Gso9g0215 1062 SUPERFAMILY RNI-like 344 597 - -
Gso9g0215 1062 PANTHER OS07G0626500 PROTEIN 6 1062 - -
Gso9g0215 1062 SUPERFAMILY Protein kinase-like (PK-like) 783 1059 IPR011009 -
Gso9g0215 1062 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Gso9g0215 1062 Pfam Leucine Rich repeat 361 376 IPR001611 GO:0005515
Gso9g0215 1062 Pfam Leucine Rich repeat 292 306 IPR001611 GO:0005515
Gso9g0215 1062 ProSiteProfiles Protein kinase domain profile. 780 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0215 1062 Pfam Protein tyrosine and serine/threonine kinase 784 983 IPR001245 GO:0004672|GO:0006468
Gso9g0215 1062 SUPERFAMILY L domain-like 43 379 - -
Gso9g0215 1062 SMART LRR_typ_2 213 236 IPR003591 -
Gso9g0215 1062 SMART LRR_typ_2 429 452 IPR003591 -
Gso9g0215 1062 SMART LRR_typ_2 313 337 IPR003591 -
Gso9g0215 1062 SMART LRR_typ_2 93 116 IPR003591 -
Gso9g0215 1062 SMART LRR_typ_2 453 477 IPR003591 -
Gso9g0215 1062 SMART LRR_typ_2 117 141 IPR003591 -
Gso9g0215 1062 SMART LRR_typ_2 503 525 IPR003591 -
Gso9g0215 1062 SMART LRR_typ_2 550 574 IPR003591 -
Gso9g0215 1062 SMART LRR_typ_2 290 312 IPR003591 -
Gso9g0215 1062 SMART LRR_typ_2 526 549 IPR003591 -
Gso9g0215 1062 SMART LRR_typ_2 165 188 IPR003591 -
Gso9g0215 1062 Gene3D Ribonuclease Inhibitor 189 260 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0215 Gso-Chr9 1990425 1996047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0215 1 1050 Receptor kinase-like Gene Family AT1G55610 27.258 7.56e-82 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso9g0215 PK_Tyr_Ser-Thr 1.7e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0215 - - gmx:100795611 2029.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1102 15 10531362 10536785 Gso9g0215 9 1990425 1996047 GST