Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0211 ATGCATTTAATTCAAACAACTCCTCACTTTCATTTCATGGCTAACTATTCCCACTCTCATATCTGCCAATGTCTGAGTGGCTTGCTGAACTTCCGGCGACATTTTTCAGTCATAATTGCCGAAAAGCGCCACAAGACCGGCCAAGAGTTGGCGGAGGAAGTGTTGTCCTTGGCACAAGGCCTACTCCACCTTGGGCTCACACCTGGTCAAGTGGTTGCCATCTCTGCTTACAATAGTGAAAGGTATCTGGAGTGGTTATTAGCCATTGCATTTGTTGGAGGAATAGCTGCTCCTCTGAACTATCGCTGGAGTTTTGAAGAGGCAAGATTAGCAATCAATGCAGTGAACCCATTGATGTTAGTGACTGATGAGAGCAGTTACGCAAGGTACTCAAAACTCCAGCAAAATGATGTTCCATCTCTGAAGTGGCATATTTTGTTGGATTCCCCTTCCTCGGATTTTACTAAGTGGAATGTGTTAACTGCTGAAATGCTTAAGAGGCATCCTGTAAAACTTCTACCATTTGACTACTCCTGGGCGCCTGAAGGCGCTGTCATAATATGCTTTACTTCAGGAACTACGGGAAAGCCTAAGGGAGTCACCCTTAGTCATGGAGCTTTGATCATACAATCCCTAGCCAAGATTGCCATAGTTGGCTACAATGAGGATGATGTCTATCTGCATACTGCTCCATTATTCCATATTGGTGGCTTGTCATCTGCCATGACCATGCTTATGGTTGGAGGTTGCCATGTCTTGATGCCAAAGTTTGATGCAGAATCCGCTGTTGATGCCATAGAGCAATATGCGGTGACATCTTTTATCACAGTTCCTGCAATAATGGCTAGTCTGATTTCTATAATTAGGCACAAAGAGACCTGGCAAGGGGGAGACACTGTCAAGAAAATTCTTAATGGGGGTGGAAGCCTCTCACATGAGCTCATCAAGGACACTAGCATATTCTTCCACAAAGCTAAACTTATTTCAGCTTATGGGATGACAGAGACATGTTCTTCATTGACATTCCTGACACTCTATGAGCCAATGCATGAAACAACAAGCCAGTCCCTTCAAGCATTTGGTGTGGCAGGATCAAAGCTCATTCACCAGCAACAAGGTGTTTGTGTTGGCAAGGCTGCACCACATATAGAACTAAAGATAAGTGCAGATGCTTCTGGTCACATTGGGAGAATTCTAACTAGAGGACCACATATAATGCTAAGGTATTGGGACCAAACTCTCACAAATCCATTAAATCCGAATAATGAAGCCTGGCTTGACACAGGTGACATTGGATCAATTGATCATTATGGTAATTTGTGGCTCCTTGGTCGAACAAATGGTCGAATCAAGAGTGGTGGGGAGAACATTTACCCTGAAGAGGTTGAGGCAATTCTACAACAACATCCAGGGATTGCAAGTGTTGTTGTTGTGGGAATCCCAGATGCTCACCTGACAGAGATGGTAGCAGCATGTATCCAACTAAGGGAAAATTGGCAATGGTCAGAGCAGTTGTCTGCTTCAAATGAAGAGTTTCTCCTATCTAGAAAGAATCTTTATCAATATTGTTTAGAAAATCATTTAAGCAGGTTTAAGATACCAAAAACGTTTATTGTATGGAGGAAGCCATTTCAACTCACCACGACAGGGAAAATAAGAAGAGACCAAGTCAGAAAAGAAGTTATGTCTCAGCTGCAATCTTTGCATAGTAATCTTTGA 1719 0.4299 MHLIQTTPHFHFMANYSHSHICQCLSGLLNFRRHFSVIIAEKRHKTGQELAEEVLSLAQGLLHLGLTPGQVVAISAYNSERYLEWLLAIAFVGGIAAPLNYRWSFEEARLAINAVNPLMLVTDESSYARYSKLQQNDVPSLKWHILLDSPSSDFTKWNVLTAEMLKRHPVKLLPFDYSWAPEGAVIICFTSGTTGKPKGVTLSHGALIIQSLAKIAIVGYNEDDVYLHTAPLFHIGGLSSAMTMLMVGGCHVLMPKFDAESAVDAIEQYAVTSFITVPAIMASLISIIRHKETWQGGDTVKKILNGGGSLSHELIKDTSIFFHKAKLISAYGMTETCSSLTFLTLYEPMHETTSQSLQAFGVAGSKLIHQQQGVCVGKAAPHIELKISADASGHIGRILTRGPHIMLRYWDQTLTNPLNPNNEAWLDTGDIGSIDHYGNLWLLGRTNGRIKSGGENIYPEEVEAILQQHPGIASVVVVGIPDAHLTEMVAACIQLRENWQWSEQLSASNEEFLLSRKNLYQYCLENHLSRFKIPKTFIVWRKPFQLTTTGKIRRDQVRKEVMSQLQSLHSNL* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0211 572 Gene3D - 16 445 IPR042099 -
Gso9g0211 572 ProSitePatterns Putative AMP-binding domain signature. 187 198 IPR020845 -
Gso9g0211 572 Gene3D - 448 565 IPR045851 -
Gso9g0211 572 PANTHER ACYL-COA SYNTHETASE 18 563 - -
Gso9g0211 572 SUPERFAMILY Acetyl-CoA synthetase-like 7 566 - -
Gso9g0211 572 CDD AFD_class_I 187 553 - -
Gso9g0211 572 PANTHER ACYL-COA SYNTHETASE FAMILY MEMBER 2, MITOCHONDRIAL 18 563 - -
Gso9g0211 572 Pfam AMP-binding enzyme 38 452 IPR000873 -
Gso9g0211 572 Pfam AMP-binding enzyme C-terminal domain 461 551 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0211 Gso-Chr9 1941822 1947747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0211 57 479 Monolignol Biosynthesis Gene Families AT3G21240 30.505 1.79e-40 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0211 K14760 - gmx:100787691 1152.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1097 15 10475161 10481769 Gso9g0211 9 1941822 1947747 GST