LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso9g0198	ATGAGTTCCCTTCGTCTGGCTTTATGCTGTGTGGTGGTAGTGCTTGGAGCACTACCACACTTCTCATATGCACAGCTAGATCCTTCATTTTACGATAGCACATGTTCAAATGTGACTTCAATCGTACGTGAGGTGCTCTCAAATGTCTCCCAGTCTGATCCCCGCATACTTGCAAGTCTCATCAGGCTCCATTTTCACGACTGTTTTGTTCAGGGGTGTGACGCATCAATTCTGCTGAACGACACGGACACGATCGTGAGCGAGCAAAGTGCAGTGCCAAACAACAACTCAATAAGAGGTTTGGATGTTGTGAACCAGATCAAGACTGCAGTGGAAAATGCTTGTCCCGGCATAGTTTCTTGTGCTGATATTCTTGCTCTTGCAGCTCAAATATCTTCTGATCTGGCTAATGGTCCTGTTTGGCAAGTTCCATTGGGAAGAAGGGATAGTTTGACAGCAAATCAAACCCTTGCTAACCAAAATCTTCCGGCTCCTACTTTTACCATTGATCAACTTATCGAATCATTTGGTAATCAAAGCCTCAACATTACTGATCTAGTTGCACTTTCAGGTGCTCATACAATTGGTAGAGCTCAATGCAGATTTTTTGTTGATCGATTATACAATTTCAGCAACACTGGCAACCCAGATCCTACTCTAAACACAACTCTCTTACAATCATTGCAAGGAATATGTCCAAATGGTGGACCTGGCACTAATCTCACCAATTTGGACTTAACCACTCCAGACACATTCGACTCCAACTATTACTCCAATCTTCAACTTCAAAATGGCTTGCTTCAGAGTGATCAAGAGTTGCTTAGTGCAAATAATACGGATATCGTTGCCATTGTCAACAATTTCATTAGTAACCAAACTCTTTTCTTTGAAAACTTTAAGGCGTCAATGATAAAAATGGGCAACATTGGAGTGCTAACGGGATCACAAGGAGAAATCCGATCGCAATGTAATTCTGTGAATGGAAATTCTTCCGGACTTACTACTACTGCCACCAAAGAATCATCACAAGATAGCATGGTTATGGACTTGGATTATACATATGGGGTGTACACATTATCACTGCACCTTCCTTCTTCAAGTGGCAGAAAAATGAGGTGTTTTGGTCTTGTAGTGATAGGTCTAGTGGTTGTGCTTGGAGGGTTACCCTTCTCTTCAAATGCAGGATTAGATCCCTTCTTTTACAAGAAGAGTTGTCCCCAGGTGCATTTCATTGTATTTAGAGTCGTAGAGAAAGTTTCAAGAACCGATACACGTATGCCTGCCAGCCTCGTCAGGCTTTTCTTTCATGACTGCTTTGTTCAAGGCTGTGACGCATCAATTTTGTTGAACAACACAGCCACCATAGTGAGTGAGCAACAAGCTCTGCCAAACAACAACTCAATAAGAGGTTTGGATGTTGTAAACGAAATCAAGACAGAGTTGGAACAAGTTTGCCCTGGTGTAGTTTCTTGCGCTGATATTCTTACCCTTGCAGCTGAAGTATCTTCTGTTCTGGCTCATGGTCCTTTTTTGAAATTCCCCTTGGGAAGGAGAGATAGTTTAACAGCAAACCGAACCCTTGCCAATGAAAACCTTCCTGCTCCTTTCTTCAACCTCACTCAACTTAAAGCTGCCTTTGCTGTTCAAGGTCTCGACACTACTGATCTTGTTGCACTCTCAGGTGCTCATTCATTTGGTAGAGCTCACTGCTTTTTCATTCTAGACCGATTGTACAATTTCAGTGGTACTGGCAGACCCGATCCAACTCTTGACACAACTTACTTGCAACAATTGCGCCAAATATGCCCCCAAGGTGGACCTAACAACCTTTTGAATTTTGACCCAACCACTCCTGATACATTGGACAAGAACTACTACTCCAATCTTAAGGTTAAGAAGGGTTTGCTCCAGAGTGATCAAGAGTTGTTCTCAACACCTGGTGCTGATACCATCAGCATTGTCAACAAGTTCAGTAGTGACCAAATAGCTTTCTTTAAGAGCTTTTCCGCTTCGATGATTAAAATGGGAAACATTGGTGTGCTAACTGGGAAGAAAGGAGAAATCAGAAAACAATGTAACTTTGTTAACAAGAAATCTGCTGAACTTGATATAGGTATTGTGGCATCCGAATCAGAGGAGGGTGTGGTTAGCTCAATATAA	2160	0.4227	MSSLRLALCCVVVVLGALPHFSYAQLDPSFYDSTCSNVTSIVREVLSNVSQSDPRILASLIRLHFHDCFVQGCDASILLNDTDTIVSEQSAVPNNNSIRGLDVVNQIKTAVENACPGIVSCADILALAAQISSDLANGPVWQVPLGRRDSLTANQTLANQNLPAPTFTIDQLIESFGNQSLNITDLVALSGAHTIGRAQCRFFVDRLYNFSNTGNPDPTLNTTLLQSLQGICPNGGPGTNLTNLDLTTPDTFDSNYYSNLQLQNGLLQSDQELLSANNTDIVAIVNNFISNQTLFFENFKASMIKMGNIGVLTGSQGEIRSQCNSVNGNSSGLTTTATKESSQDSMVMDLDYTYGVYTLSLHLPSSSGRKMRCFGLVVIGLVVVLGGLPFSSNAGLDPFFYKKSCPQVHFIVFRVVEKVSRTDTRMPASLVRLFFHDCFVQGCDASILLNNTATIVSEQQALPNNNSIRGLDVVNEIKTELEQVCPGVVSCADILTLAAEVSSVLAHGPFLKFPLGRRDSLTANRTLANENLPAPFFNLTQLKAAFAVQGLDTTDLVALSGAHSFGRAHCFFILDRLYNFSGTGRPDPTLDTTYLQQLRQICPQGGPNNLLNFDPTTPDTLDKNYYSNLKVKKGLLQSDQELFSTPGADTISIVNKFSSDQIAFFKSFSASMIKMGNIGVLTGKKGEIRKQCNFVNKKSAELDIGIVASESEEGVVSSI*	720

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso9g0198	719	ProSitePatterns	Peroxidases proximal heme-ligand signature.	185	195	IPR019793	-
	Gso9g0198	719	ProSitePatterns	Peroxidases proximal heme-ligand signature.	555	565	IPR019793	-
	Gso9g0198	719	SUPERFAMILY	Heme-dependent peroxidases	396	696	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Gso9g0198	719	CDD	secretory_peroxidase	395	695	IPR033905	GO:0004601\|GO:0042744
	Gso9g0198	719	PRINTS	Haem peroxidase superfamily signature	57	71	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Gso9g0198	719	PRINTS	Haem peroxidase superfamily signature	119	136	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Gso9g0198	719	PRINTS	Haem peroxidase superfamily signature	137	149	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Gso9g0198	719	PRINTS	Haem peroxidase superfamily signature	185	200	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Gso9g0198	719	PRINTS	Haem peroxidase superfamily signature	245	260	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Gso9g0198	719	Gene3D	-	30	327	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso9g0198	Gso-Chr9	1815016	1825049	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso9g0198	373	696	Peroxidase	AT5G06720	54.154	2.11e-118	357

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso9g0198	-		K00430	aprc:113852209	932.554

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