Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0187 ATGAAGGAAGGTGGTGGTAGAAAGCAAGGTGCAGCCTCACCTTGTGCTGCATGCAAGCTTCTGAGGAGAAGGTGTGCTCAGGATTGTGTTTTTGCTCCATATTTTCCAGCAGATGAACCACAAAAGTTTGCAAATGTGCACAAGGTGTTTGGTGCTAGCAATGTCAACAAGATGCTTCAGGACCTACCGATGCATCAACGAGGGGATGCAGTGAGTAGCATGGTGTATGAGGCCAATGCCAGAGTCCGAGACCCTGTTTATGGGTGTGTTGGGGCCATCTCTTCGCTTCAGCAACAGATTGATGTGTTACAGACCCAATTGGCCCGGGCCCAGGCTGAGGTGGCCCATCTTCGGGTGAGACAAAACAGATGCTTTTCCAATCATGGGCTTAGGCCCACTAGCCCAACCCATAGTGGGTTTCCATCATCCAAGACCTTGGACTCACATGCCAAGCCTATTTTTGACATAGACATGGTGGACCAGGCCAGCTATGGTGGTTCAATGTGGTCATGA 513 0.5029 MKEGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPMHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLARAQAEVAHLRVRQNRCFSNHGLRPTSPTHSGFPSSKTLDSHAKPIFDIDMVDQASYGGSMWS* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0187 170 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Gso9g0187 170 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Gso9g0187 170 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 155 - -
Gso9g0187 170 Coils Coil 93 120 - -
Gso9g0187 170 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0187 Gso-Chr9 1704693 1709081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0187 1 170 AS2 family AT1G31320 79.070 3.90e-79 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso9g0187 LOB 2.1e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0187 - - gmx:100794219 351.288