Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0179 ATGGCTGACTTTGTCCTTGAAATTGTGCTTGAGAATTTGATCTCACTTGTTCGAAAGGAGTTGGTACTATTTCTGGGTTTTGACCAAGACTTGGAAAGGCTTTCAAGCTTGTTCGCTACAATCAAGGCTACACTTCAAGATGCTGAGGAGAAACAATTCTCAAACGCAGCCATAAAAGATTGGCTGGGAAAACTAAAATATGCAGCTCACGTTCTGGATGACTTCATTGACGAGTGTGCCTATGAAGGATTGGGGTTGGAGAACCAAGGGGTCATGTGTGGTCCTTCAGACAAGGTACAATGCTCTTGCTTATCCTCTTTGCATCCCAAGCGTGTTGTTTTCCGTTACAAAATTGTTAAGAAAATGAAAAGGATAAGTCAGAGATTAATACAAATCGCTGAAGAAAGGACTAAGTTTCATTTGACTGAGATGGTTCGTGAGAGAAGAAGTGGAGTCCTTGAGTGGCGCCAAACTGTCTCTCTACTTACTGAACCAAAAGTCTATGGAAGAGAAGAAGAGAAAGATAAAATTTTAGACTTTTTGATTGGTGATGCTTCTCATTTTGAGGATTTATCTGTCTATCCAATAACTGGTCTAGGTGGACTTGGAAAAACAACACTTGCCCAATTCATCTTCAATCATGAGAAGGTAGTCAACCACTTTGAGTTAAGAATTTGGGTATGTGTTTCAGAAGATTTTAGTTTGAAGAGAATGACGAAAGTTATCATTGAAGCAGCATCTGGGCGTGCTTGTGAAGATTTGGATCTAGAGCCACAACAAAGAAGACTTCAAGATTTACTTCAAAGAAAAAGATATTTGCTTGTTTTGGATGACGTGTGGGATGATAAACAACAGAATTGGCAGAGGTTGAAACCTGTACTTGCTTGTGGGGCCAAAGGTGCTTCTATTTTAGTTACTACTCGCCTTTTGCAGGTTGCAAAAATCATGGGAACATTGCCTCCTCATGAATTATCAGTCCTGTCCGACAATGATTGTTGGGAATTGTTTAAACACCAAGCCTTTGGACCGAATGAGGGAGAACAGATAGAGCTTGAGAAGATAGGGAAGGAGATAGTAAAGAAGTGTCAAGGAATGCCTCTTGCTGCAAAAGCACTAGGAGGTCTTTTACGCTTCAAGAGAAACAAAAATGAGTGGCTCAATGCTAAGGAAAGCAACCTTTTGGAGTTATCACACAATGAAAACCCCATAAGTCATGTCCTGAGATTGAGTTACTTGAACTTACCAATTGAGCACAAGCAATGTTTTGCTTATTGCGCAATATTTCCCAAAGATGAAAGCATAGGGAAACAATACATAATTGAACTTTGGATGGCTAATGGATTCATTTCATCTAATGAAAGATTAGATGCCCTAGATGTCGGGGATGATTTGTGGAATGAATTATATTGGAGATCATTTTTTCAAGATATTGAGACAAATGAATTTGGCAACATTACAAGTTTCAAGATGCATGATCTTGTTCATGATCTTGCACTATCTGTTGCAGAAGATGTTTGTTGCACTACAAAAGACAGTCGTGTAACTACTTTTCCTGGAAGAATTCTCCATCTCTCAGATCATAGGTCCATGCAGAATGTACATGAGGAACCCATTGATTCAGTGCAGTTGCATCTATTCAAAACTTTGAGGACCTATATATTGCCAGATCACTATGGTGACCAACTTTCTCCGCATCCTAATGTGTTGAAATGTCATTCCTTGCGGGTGCTTGATTTTGTAAAGCGAGAAAAATTGTCATCATCAATTGGTCTTTTAAAGCATCTAAGGTACTTGAATCTTTCTGGGGGTGGCTTCGAAACTCTGCCAGAATCAGTATGTAAACTATGGAATTTGCAGATATTGAAATTAGATCGTTGCAGTCGTCTCAAAATGTTGCCTAACAGTTTGGTATGCTTAAAAGCTCTACAACAACTATCTTTTAATGGTTGCCCAGAACTATCAAGATTACCTCCTCGAATAGGGAAGTTAACTTCCCTAAGGATTTTACCGAAGTTCTTTGTTGGCAAAGAAAGAGGGTTCCGTTTGGAAGAATTGGGACCGCTAAAGCTTAAAGGAGATCTTGACATCAAGCATCTTGAAAATGTAAAAAGTGTAATGGATGTCAAAGAAGCCAATATGTCAAGTAAGCAGTTGAATAAGTTGTTTCTGTCATGGGAAAAAAATGAAAACTGTGAATTAGAGGACAATGTTGAAGAGACTCTTGAAGTGCTTCAACCTGATACCCAACAACTTTGGAGACTAGAAGTGGACGGATATGAAGGTGCCCATTTCCCGCAGTGGATATCTAGTCTTTCTCTCAAATATTTAAACTTGAAAGATTGCAAAAACTGTTTACAGCTTCCACCGTTGTATAAACTTCCTTCTCTTAACACTCTAAGAATACTTAACATGATTCATGTTGAGTACCTCTACGAGGAGTCCTATGATGGGGAAGTGGTTTTCAGGGCTCTAGAAGAGCTGACATTGCGTCGACTTCCAAACCTAAAAAGGTTATCAAGGGAGGATAGGGAAAACATGTTCCCATGCTTTTCCAGACTTGAAATTGATGAATGTCCTAAATTTTTTGGAGAGGAAGTTTTGCTACAAGGGTTGCGCTCTCTCTCAGTATTCAATTGTGGCAAATTCAATGTGTCCTCAGGTTTTAAATGCCTTCATAAATTATGGCTTTCCAATTGTGCAGCAGTGGAAGATTTGCAGGCTTTACAAGATATGACTTCCCTGCAGGAGTTAAGATTAACGGGTCTTCCAAAGCTAGAATCCTTGCCAGACTGCTTTGGAGACATTCCCTTGCTTCACACATTTAGTATTTTTTACTGTTCCAAGTTGACGTATCTTCCAATGAGCCTAAGACTTACCACCAGTCTGCAACAATTGACTATTTTTGGTTGTCATCCTGAGTTAGAGAAGAGATGTGATAAAGAAACGGGAGAGGACTGGCCAAACATAGTTCACATTTCCCATATTTCATTGGGAATTAAACATTATGATCATAATTCCGATTGA 3024 0.3915 MADFVLEIVLENLISLVRKELVLFLGFDQDLERLSSLFATIKATLQDAEEKQFSNAAIKDWLGKLKYAAHVLDDFIDECAYEGLGLENQGVMCGPSDKVQCSCLSSLHPKRVVFRYKIVKKMKRISQRLIQIAEERTKFHLTEMVRERRSGVLEWRQTVSLLTEPKVYGREEEKDKILDFLIGDASHFEDLSVYPITGLGGLGKTTLAQFIFNHEKVVNHFELRIWVCVSEDFSLKRMTKVIIEAASGRACEDLDLEPQQRRLQDLLQRKRYLLVLDDVWDDKQQNWQRLKPVLACGAKGASILVTTRLLQVAKIMGTLPPHELSVLSDNDCWELFKHQAFGPNEGEQIELEKIGKEIVKKCQGMPLAAKALGGLLRFKRNKNEWLNAKESNLLELSHNENPISHVLRLSYLNLPIEHKQCFAYCAIFPKDESIGKQYIIELWMANGFISSNERLDALDVGDDLWNELYWRSFFQDIETNEFGNITSFKMHDLVHDLALSVAEDVCCTTKDSRVTTFPGRILHLSDHRSMQNVHEEPIDSVQLHLFKTLRTYILPDHYGDQLSPHPNVLKCHSLRVLDFVKREKLSSSIGLLKHLRYLNLSGGGFETLPESVCKLWNLQILKLDRCSRLKMLPNSLVCLKALQQLSFNGCPELSRLPPRIGKLTSLRILPKFFVGKERGFRLEELGPLKLKGDLDIKHLENVKSVMDVKEANMSSKQLNKLFLSWEKNENCELEDNVEETLEVLQPDTQQLWRLEVDGYEGAHFPQWISSLSLKYLNLKDCKNCLQLPPLYKLPSLNTLRILNMIHVEYLYEESYDGEVVFRALEELTLRRLPNLKRLSREDRENMFPCFSRLEIDECPKFFGEEVLLQGLRSLSVFNCGKFNVSSGFKCLHKLWLSNCAAVEDLQALQDMTSLQELRLTGLPKLESLPDCFGDIPLLHTFSIFYCSKLTYLPMSLRLTTSLQQLTIFGCHPELEKRCDKETGEDWPNIVHISHISLGIKHYDHNSD* 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0179 1007 Gene3D - 154 318 IPR027417 -
Gso9g0179 1007 Pfam NB-ARC domain 171 411 IPR002182 GO:0043531
Gso9g0179 1007 SUPERFAMILY L domain-like 474 990 - -
Gso9g0179 1007 CDD RX-CC_like 2 134 IPR038005 -
Gso9g0179 1007 Gene3D Ribonuclease Inhibitor 871 993 IPR032675 -
Gso9g0179 1007 Gene3D - 411 500 IPR036388 -
Gso9g0179 1007 PRINTS Disease resistance protein signature 193 208 - -
Gso9g0179 1007 PRINTS Disease resistance protein signature 266 280 - -
Gso9g0179 1007 PRINTS Disease resistance protein signature 362 376 - -
Gso9g0179 1007 PRINTS Disease resistance protein signature 613 629 - -
Gso9g0179 1007 Pfam Rx N-terminal domain 5 87 IPR041118 -
Gso9g0179 1007 Gene3D Ribonuclease Inhibitor 682 870 IPR032675 -
Gso9g0179 1007 PANTHER OS10G0130600 PROTEIN 34 970 - -
Gso9g0179 1007 Gene3D - 6 130 - -
Gso9g0179 1007 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 425 IPR027417 -
Gso9g0179 1007 Coils Coil 31 51 - -
Gso9g0179 1007 PANTHER DISEASE RESISTANCE PROTEIN RP 34 970 IPR044974 GO:0006952
Gso9g0179 1007 Gene3D Ribonuclease Inhibitor 524 673 IPR032675 -
Gso9g0179 1007 Gene3D - 326 410 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0179 Gso-Chr9 1612618 1618207 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0179 190 664 WRKY Transcription Factor Family AT5G45050 21.779 5.57e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0179 - - gmx:102666690 1998.02