Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0166 ATGGGTGAAAGAATAATACTGATACTACTACTAGTGCTTTCCTTCAACTTTTTGTTGCTTGCAGTAGCACAAGATGTTAATAGTGATTTTGCAGTCCTAAAGTCTCTAAGAGGTTCTTGGCTAAGCCCAACTCCCAATTGGGAGGGTTCAGATCCTTGCAAGGACTGGGAAGGCATTAAGTGCAAAAACTCACGTGTTATTTCCATATCATTATCAGATATTGGCTTGACTGGCCACCTTTCAGGAGATATTGGATCACTTTCTGAGTTGGAGATTCTGGATCTCTCATACAATAGGGGCCTCACAGGATCACTTCCACAAGAAATTGGAAACTTGAAGAAGCTATTAAAATTAGTTCTAGTTGGTTGTGGTTTTACTGGTCGTATTCCAGATGAAATAGGATTTCTAGAACAGCTTGTTTTCTTATCTTTAAACTCCAACAATTTTGTTGGACCAATTCCACCTTCTATTGGCAATCTGTCAAATCTTACTTGGCTAGATTTAGCTGACAATCAGCTTGATGGATCCATCCCAGTATCTAGTGGCACTACCTCTGGTCTTGATATGTTGCAAAAAACACTGCACTTTCATCTTGGGAAGAATAGGCTTTCAGGAGAAATTCCTCCAAAACTTTTTAGCTCGAAAATGACTCTGATACATGTGATTTTTTACAGTAATAAACTAGTTGGAAGCATTCCAGAAACGCTTGGACTAGTTAAGAGTCTGACGTTGGTACGCTTTGAAAATAATTCATTGAATGGATATGTGCCCCAGACCCTCAGCAACCTTACCAATGTCACAGACCTGTTGTTGTCCAACAATAAGCTGCAAGGTGCCCTGCCAAACCTTACTGGGATGAACTCCCTAAAATACTTGGATTTGAGCAACAATAGCTTTGACAAGTCAGATTTTCCACTGTGGCTTTCAAATCTGAAGAATTTAACAACATTACAAATGGAGAGTGTGGACCTTAACGGAAACATTCCAGTTAATTTATTTAGCCTTGCCTATTTACAAAATGTTGTGCTAAACAACAACAACCTTGGTGGAACCTTGGATATTGGCACCAACAACAGAAAACACCTGAAACTTGTTAATTTGAAGTCAAATTCAATTCAGGACTTCGAGCAACAAAATGATCTCCCAGAGAATATCACGATAATACTTGAGTCCAACCCCATTTGTACAGAAACAGGAGCTATGGAGAGGAGTTACTGCAAAAAACACAACATCTTAGATACAGAACCACAAAATAAATGTCCACCTGATAGTTGCAGTCGAGATCAGATTCTAAGTCCCAAGTGCATATGTGGATATCCAATTACAGGAACTTTGACTTTCAGAGCACCCTCATATTTTGAATGGAGAGACACAACATCCCTGGAGAAACATCTTTTGCAAGAATTTCAATCTCATGATCTACCTGTGGATTCAGTTTCTTTAATCATTTCAGATCCATTTCATAGTTTTGTGTATACCATACAAATTTTCCCACGAGGCCAAGATCGTTTCGACCGACAAGACAAATCTACAATAAGCTCTATTCTTGGCAACCTAAGTGCTACTAGTCCATATGATTTTATTACAGGAAACCAAGGACCGAAGGAGTCAACTAATTCATCAAGCAAGGTCTTAATTATTCGAGTAGCAGTTGGTGGTTCTTCCGTTATGCTTGTTTTATTAGTCCTTGCAGGTGTTTATGCTTTCTGCCAGAAGAGAAGAGCAGAAAGAGCCATTTCTCGAAGCAATCCTTTTGGAAACTGGGATCCAAATAAAAGCAACTGCGGCACTCCTCAGTTAAAAGCAGCAAGGCAGTTTTCATTTAAAGAAATTAAGAAATACACAAACAACTTCTCACAAGACAATGATATTGGATCAGGGGGTTATGGAAAGGTTTATCGGGGAACTCTTCCCAGTGGGCAAGTGGTAGCCATAAAACGAGCTCAAAGAGAATCAAAGCAGGGAGGGCTAGAATTCAAAGCTGAAATTGAACTCCTTTCAAGGGTCCACCACAAGAATCTGGTTAGCCTTGTGGGATTCTGCTTTGAACGAGAAGAACAAATGCTGGTTTATGAGTTTGTTCCAAATGGAACTTTGAAGGATGCTCTCACAGGGGAATCTGGAATTGTGTTGAGCTGGAGTAGAAGACTGAAAGTAGCCCTTGGTGCTGCCAGGGGTTTGGCTTATCTTCATGAACATGCTGATCCCCCTATTATACACAGGGACATCAAATCAAACAACATTTTGCTGAATGAAAACTATACTGCAAAAGTTTCTGATTTTGGTCTCTCCAAGTCTATCTTAGATGATGAAAAAGATTACGTCTCCACTCAAGTTAAAGGAACAATGGGCTACTTGGATCCAGATTATTATACTAGTCAGAAGTTGACTGAAAAGAGTGATGTCTATAGTTTTGGAGTGCTAATACTGGAGCTGATTACTGCAAGAAAGCCAATAGAACGAGGGAAATACATTGTGAAAGTGGTCAGGAGTACAATAGATAAGACAAAAGACTTGTATGGTCTTCACAAAATTATTGACCCGGCCATCTGTTCAGGATCAACACTGGAGGGTTTTGAGAAGTTTGTGGACCTTGCAATGGAGTGTGTTGAAGATTCAGGAGCTGACAGGCCCGCAATGAGTGATGTGGTTAAAGAAATTGAAGACATGTTGCAGTCTGTTGGTATGCACCTAACATCTGAATCAGTAACATCCACAACATCTAGTCATAGATATCAGGAGGTAAGTATAGTGAGTTTCCATCTGGACCAACCTTACAGCAATGAGTCCTTTGGTTCAAGTGCAGAACATATTCAAAAATTGAACCTAGTTAGTTAA 2838 0.3971 MGERIILILLLVLSFNFLLLAVAQDVNSDFAVLKSLRGSWLSPTPNWEGSDPCKDWEGIKCKNSRVISISLSDIGLTGHLSGDIGSLSELEILDLSYNRGLTGSLPQEIGNLKKLLKLVLVGCGFTGRIPDEIGFLEQLVFLSLNSNNFVGPIPPSIGNLSNLTWLDLADNQLDGSIPVSSGTTSGLDMLQKTLHFHLGKNRLSGEIPPKLFSSKMTLIHVIFYSNKLVGSIPETLGLVKSLTLVRFENNSLNGYVPQTLSNLTNVTDLLLSNNKLQGALPNLTGMNSLKYLDLSNNSFDKSDFPLWLSNLKNLTTLQMESVDLNGNIPVNLFSLAYLQNVVLNNNNLGGTLDIGTNNRKHLKLVNLKSNSIQDFEQQNDLPENITIILESNPICTETGAMERSYCKKHNILDTEPQNKCPPDSCSRDQILSPKCICGYPITGTLTFRAPSYFEWRDTTSLEKHLLQEFQSHDLPVDSVSLIISDPFHSFVYTIQIFPRGQDRFDRQDKSTISSILGNLSATSPYDFITGNQGPKESTNSSSKVLIIRVAVGGSSVMLVLLVLAGVYAFCQKRRAERAISRSNPFGNWDPNKSNCGTPQLKAARQFSFKEIKKYTNNFSQDNDIGSGGYGKVYRGTLPSGQVVAIKRAQRESKQGGLEFKAEIELLSRVHHKNLVSLVGFCFEREEQMLVYEFVPNGTLKDALTGESGIVLSWSRRLKVALGAARGLAYLHEHADPPIIHRDIKSNNILLNENYTAKVSDFGLSKSILDDEKDYVSTQVKGTMGYLDPDYYTSQKLTEKSDVYSFGVLILELITARKPIERGKYIVKVVRSTIDKTKDLYGLHKIIDPAICSGSTLEGFEKFVDLAMECVEDSGADRPAMSDVVKEIEDMLQSVGMHLTSESVTSTTSSHRYQEVSIVSFHLDQPYSNESFGSSAEHIQKLNLVS* 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0166 945 Pfam Protein tyrosine and serine/threonine kinase 620 886 IPR001245 GO:0004672|GO:0006468
Gso9g0166 945 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 4 928 - -
Gso9g0166 945 Gene3D Transferase(Phosphotransferase) domain 1 694 912 - -
Gso9g0166 945 CDD STKc_IRAK 624 890 - -
Gso9g0166 945 ProSitePatterns Serine/Threonine protein kinases active-site signature. 738 750 IPR008271 GO:0004672|GO:0006468
Gso9g0166 945 Gene3D Phosphorylase Kinase; domain 1 589 693 - -
Gso9g0166 945 SUPERFAMILY L domain-like 28 418 - -
Gso9g0166 945 SUPERFAMILY Protein kinase-like (PK-like) 604 910 IPR011009 -
Gso9g0166 945 Gene3D Ribonuclease Inhibitor 187 395 IPR032675 -
Gso9g0166 945 Gene3D Ribonuclease Inhibitor 18 186 IPR032675 -
Gso9g0166 945 SMART serkin_6 618 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0166 945 ProSiteProfiles Protein kinase domain profile. 618 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0166 945 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 4 928 - -
Gso9g0166 945 ProSitePatterns Protein kinases ATP-binding region signature. 624 646 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0166 Gso-Chr9 1466498 1472998 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0166 1 935 Receptor kinase-like Gene Family AT5G49760 51.247 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Gso9g0166 PK_Tyr_Ser-Thr 6.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0166 - - gmx:100810323 1811.58