Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0165 ATGGGTGAAAGAGTTATAGTATTGATACTACTCTTTTTCACTCATTTGTTGATTGTATTCACAAAGACATCACCTCAGGATTCTGCTGCTCTGCTGGCTCTAGTGAATGAATGGCAGAACACACCACCTAATTGGGATGGTACAGATCCTTGTGGTGCTGGTTGGGATGGAATTGAGTGTACCAATTCACGAATTACCTCCATATCATTAGCAAGCATGGATTTGTCAGGCCAGCTTACTTCAGATATTGGATCACTATCTGAACTGCTGATTTTGGATCTGTCTTACAATAAGAAATTAACTGGACCACTTCCAAATGACATTGGAAACTTGAGAAAACTGAGAAATTTACTTGTTATTAATTGTGGTTTCACTGGTCCTATCCCAGTTACAATTGGAAATCTAGAACGGCTTGTCTTCCTATCTTTAAATTCTAATGGTTTCACTGGGCCGATTCCAGCTGCCATTGGTAATCTCTCAAATGTTTATTGGCTAGACTTAGCCGAAAATCAGCTTGAAGGACCCATCCCCATATCTAATGGAACTACTCCTGGTCTTGATATGATGCACCATACAAAGCACTTCCATTTTGGGAAGAATAAGCTTTCTGGAAACATTCCTTCTCAACTTTTTAGCCCAGAAATGTCTCTCATACATGTGCTTTTTGAATCCAACCGATTTACTGGCAGCATTCCATCTACACTTGGCCTTGTCAAGACTCTGGAGGTGGTGCGCTTTGATGATAACGTTTTAAGTGGACCTGTGCCTCTGAACATCAACAATCTTACAAGTGTTAGGGAATTGTTCCTATCCAATAACCGCCTGTCTGGTTCCCCCCCAAACCTTACTGGAATGAATTCCCTCAGTTACCTAGATATGAGCAATAACAGTTTTGATCAATCATACTTTCCACCGTGGTTGCCAACTCTTCCCGCTCTGACGACAATAATGATGGAGAATACAAAACTTCAAGGTCGTATTCCTGTTTCTTTGTTCAGCCTGCAACAGTTGCAGACAGTGGTGCTGAAAAACAACCAGCTAAATGGCACTTTAGATATTGGCACCTCCATCAGCAACAACCTGGATCTCCTTGATTTGCAGATTAATTTCATTGAAGATTTTGATCCACAAATTGATGTCTCTAAAGTGGAGATAATACTTGTGAATAATCCAATTTGCCAAGAGACAGGAGTTCCACAAACTTATTGCTCCATTACAAAATCCAATGACTCGTATTCAACGCCACCAGATAACTGTGTGCCTGTTCCCTGCAGCTTAGATCAGACATTAAGCCCCGAGTGCAAATGTGCATACCCATATGAAGGAACTTTAGTTCTCAGAGCTCCTTCTTTCTCAGACTTGGAAAACAAGACAATCTTTGTAACTCTGGAGTCTTCTCTGATGGAGTCTTTTCAACTTCATAAGAAACCTGTGGATTCAATTTCTTTAAGCAATCCAAGGAAGAATATATATCAGTACCTTGAATTGACTTTAAAAATATTTCCATTAGGCCAAGATCGTTTCAATCGAACAGGGATTTCTGATATAGGCTTTCTTCTCAGCAACCAAACATACAAGCCTCCTCCAATGTTTGGACCTTATTATTTTATTGCTGACGAGTATGAAAACTATGTGGATAATTCAGAAGGTCCTGTGACATCAAATAGAAAATCTTCAAATACTGGCATCATAGCTGGAGCTGGTGGTGGTGGTGCTGCCCTGTTGGTGTTAGTACTCCTTGCATGTGTGTACGCTATCAGCCGGAAGAAAAAGACCAAAAAATCAACTGGGAATAACAATCCTTTTGAACAATGGGATCCGCATGACAGCAATAGTAGCATCCCACAGTTGAAAGGAGCTAGGCGCTTCAGTTTTGAAGAGATACAGAACTGCACCAAAAACTTTTCACAAGTCAATAATATAGGATCTGGCGGTTATGGGAAGGTTTATCGGGGAACTCTTCCCAACGGACAACTAATTGCAGTAAAGCGAGCTCAAAAGGAATCTATGCAAGGAGGGCTGGAGTTCAAAACTGAGATTGAACTTCTATCAAGGGTCCACCATAAAAATCTTGTTAGCCTGGTCGGTTTCTGCTTTGACCAAGGAGAACAAATGCTGATATATGAGTATGTTGCAAATGGTACTTTGAAGGATACTCTTTCAGGGAAGTCTGGAATTAGATTGGACTGGATTAGAAGGCTAAAAATAGCCCTTGGTGCTGCGAGGGGGCTGGATTATCTGCATGAACTAGCAAATCCTCCAATCATACACAGGGACATCAAATCCACTAACATTTTACTGGATGAGCGCTTGATTGCTAAAGTATCTGATTTTGGTCTCTCCAAGCCTTTGGGTGAAGGTGCAAAAGGTTATATTACCACACAAGTCAAAGGAACAATGGGCTACTTGGACCCAGAGTATTATATGACTCAACAGTTGACTGAGAAAAGTGATGTTTATAGCTTTGGAGTGCTATTGTTGGAGCTGATAACTGCAAGAAGGCCAATAGAGCGAGGGAAATATATTGTGAAAGTGGTAAAGGGTGCTATCGACAAGACAAAAGGCTTCTATGGTCTTGAGGAAATTCTTGATCCAACCATTGATCTGGGGACAGCACTGAGCGGTTTTGAGAAGTTTGTGGACATTGCAATGCAGTGTGTTGAAGAGTCAAGTTTTGACAGGCCTACAATGAATTATGTGGTTAAAGAAATTGAAAACATGTTGCAGTTGGCTGGTTCAAGCCCAATTTTTTCAGCATCAGCATCAGTATCCACTTCATCTAGTTATAATAATGCAACCAAAATTTCCCTGCATCCTTACAACAATGAATACTTTGATTCAAGTGTGGTACTTCCACGAGCATAA 2865 0.4073 MGERVIVLILLFFTHLLIVFTKTSPQDSAALLALVNEWQNTPPNWDGTDPCGAGWDGIECTNSRITSISLASMDLSGQLTSDIGSLSELLILDLSYNKKLTGPLPNDIGNLRKLRNLLVINCGFTGPIPVTIGNLERLVFLSLNSNGFTGPIPAAIGNLSNVYWLDLAENQLEGPIPISNGTTPGLDMMHHTKHFHFGKNKLSGNIPSQLFSPEMSLIHVLFESNRFTGSIPSTLGLVKTLEVVRFDDNVLSGPVPLNINNLTSVRELFLSNNRLSGSPPNLTGMNSLSYLDMSNNSFDQSYFPPWLPTLPALTTIMMENTKLQGRIPVSLFSLQQLQTVVLKNNQLNGTLDIGTSISNNLDLLDLQINFIEDFDPQIDVSKVEIILVNNPICQETGVPQTYCSITKSNDSYSTPPDNCVPVPCSLDQTLSPECKCAYPYEGTLVLRAPSFSDLENKTIFVTLESSLMESFQLHKKPVDSISLSNPRKNIYQYLELTLKIFPLGQDRFNRTGISDIGFLLSNQTYKPPPMFGPYYFIADEYENYVDNSEGPVTSNRKSSNTGIIAGAGGGGAALLVLVLLACVYAISRKKKTKKSTGNNNPFEQWDPHDSNSSIPQLKGARRFSFEEIQNCTKNFSQVNNIGSGGYGKVYRGTLPNGQLIAVKRAQKESMQGGLEFKTEIELLSRVHHKNLVSLVGFCFDQGEQMLIYEYVANGTLKDTLSGKSGIRLDWIRRLKIALGAARGLDYLHELANPPIIHRDIKSTNILLDERLIAKVSDFGLSKPLGEGAKGYITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLLLELITARRPIERGKYIVKVVKGAIDKTKGFYGLEEILDPTIDLGTALSGFEKFVDIAMQCVEESSFDRPTMNYVVKEIENMLQLAGSSPIFSASASVSTSSSYNNATKISLHPYNNEYFDSSVVLPRA* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0165 954 Gene3D Transferase(Phosphotransferase) domain 1 711 916 - -
Gso9g0165 954 Gene3D Ribonuclease Inhibitor 280 418 IPR032675 -
Gso9g0165 954 ProSitePatterns Protein kinases ATP-binding region signature. 641 663 IPR017441 GO:0005524
Gso9g0165 954 PANTHER - 6 931 - -
Gso9g0165 954 CDD STKc_IRAK 641 907 - -
Gso9g0165 954 MobiDBLite consensus disorder prediction 597 613 - -
Gso9g0165 954 ProSiteProfiles Protein kinase domain profile. 635 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0165 954 Pfam Protein tyrosine and serine/threonine kinase 638 903 IPR001245 GO:0004672|GO:0006468
Gso9g0165 954 Gene3D Ribonuclease Inhibitor 181 279 IPR032675 -
Gso9g0165 954 Gene3D Ribonuclease Inhibitor 23 180 IPR032675 -
Gso9g0165 954 SMART serkin_6 635 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0165 954 Gene3D Phosphorylase Kinase; domain 1 606 710 - -
Gso9g0165 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 755 767 IPR008271 GO:0004672|GO:0006468
Gso9g0165 954 MobiDBLite consensus disorder prediction 592 613 - -
Gso9g0165 954 SUPERFAMILY Protein kinase-like (PK-like) 621 922 IPR011009 -
Gso9g0165 954 SUPERFAMILY L domain-like 44 394 - -
Gso9g0165 954 Coils Coil 954 954 - -
Gso9g0165 954 Pfam Leucine rich repeat N-terminal domain 25 60 IPR013210 -
Gso9g0165 954 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 6 931 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0165 Gso-Chr9 1453192 1460556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0165 7 954 Receptor kinase-like Gene Family AT5G49760 56.782 0.0 1034
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Gso9g0165 PK_Tyr_Ser-Thr 5.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0165 - - gmx:100782366 1838.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1050 15 9924898 9932043 Gso9g0165 9 1453192 1460556 GST
Gso7g2295 7 46533576 46540313 Gso9g0165 9 1453192 1460556 PCT