Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0151 ATGCCTCACCAGCACATAGATTGTGGTGGCAGCACAATGGATCCTGGCAGTGGAGGAAACAGTCTTGGCAACAACTCTAATCTCGCTTCAAAACAACGTTTACGGTGGACACATGAATTACATGAGCGCTTTGTTGATGCTGTGGCTCAACTTGGTGGGCCAGATCGTGCCACACCCAAAGGTGTCCTCAGAGTTATGGGTGTACAAGGCTTGACCATTTACCATGTCAAAAGCCATTTACAGAAATACCGACTTGCAAAATATTTACCTGACTCCTCATCTGATGAAGGGAAAAAGGCTGACAAGAAAGAAACAGGGGATATGCTTTCCAATCTTGATGGTTCATCTGGGATGCAGATTACTGAAGCACTAAAGCTTCAAATGGAGGTTCAGAAGCGACTACATGAACAATTGGAGGTGCAGAGACAGCTACAATTACGGATAGAGGCCCAGGGTAAATACCTGAAAAAGATAATCGAAGAACAGCAGCGGCTCAGTGGCGTTCTTTCGGAGACTCCTGGCTCTGGGGTTGCAGCCGTTGCTCCAGGGGATGCATGCCAAGAACCTGATAATAAGACTGACCCGTCAACCCCTGACCCTGAAAAGGCCGCCAAAGACCGTGCTCCGGCAAAAAGTCTTTCAATAGAATCTTTTTCATCTCACCTTGAACCGATGACACCAGATTCTGGCTGCCATGTTGGTTCCCCTGCTGAAAGCCCTAAAGGGGAGAGATCAGCCAAGAAGCAACGAGTAATCATGGATGGCGTGTATTCTAAACCAGAAATGGTGCTTCCACATCAGATACTGGAGTCAAGCATGTCATTATACCAGCAACCTAACACTGTTTTTCTTGGCCAAGACCAATTTGATCCTTCTTTGGGTATATCTACCAGAAGTGGTGAGGAATTGGATAAGGTTGGTGGTGGTAATCTGTGA 936 0.4669 MPHQHIDCGGSTMDPGSGGNSLGNNSNLASKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDEGKKADKKETGDMLSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSETPGSGVAAVAPGDACQEPDNKTDPSTPDPEKAAKDRAPAKSLSIESFSSHLEPMTPDSGCHVGSPAESPKGERSAKKQRVIMDGVYSKPEMVLPHQILESSMSLYQQPNTVFLGQDQFDPSLGISTRSGEELDKVGGGNL* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0151 311 Pfam Myb-like DNA-binding domain 34 84 IPR001005 -
Gso9g0151 311 MobiDBLite consensus disorder prediction 169 250 - -
Gso9g0151 311 Gene3D - 30 89 - -
Gso9g0151 311 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 3 303 - -
Gso9g0151 311 MobiDBLite consensus disorder prediction 90 108 - -
Gso9g0151 311 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 303 IPR044848 GO:0003700
Gso9g0151 311 Pfam MYB-CC type transfactor, LHEQLE motif 118 164 IPR025756 -
Gso9g0151 311 MobiDBLite consensus disorder prediction 194 209 - -
Gso9g0151 311 SUPERFAMILY Homeodomain-like 30 85 IPR009057 -
Gso9g0151 311 MobiDBLite consensus disorder prediction 1 27 - -
Gso9g0151 311 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 31 86 IPR006447 GO:0003677
Gso9g0151 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 88 IPR017930 -
Gso9g0151 311 Coils Coil 121 141 - -
Gso9g0151 311 MobiDBLite consensus disorder prediction 90 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0151 Gso-Chr9 1337259 1344812 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0151 66 311 G2-like Transcription Factor Family AT2G01060 63.529 1.77e-90 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso9g0151 Myb_DNA-binding 2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0151 - - gmx:100784511 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1036 15 9789977 9797674 Gso9g0151 9 1337259 1344812 GST