Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0150 ATGTACCCGAGGCTCATACACCCCCACGATGGGATTGTGACGCAGGATGAGTTGCAGGGTGGTGCTGCTTCCAACCTCTCTCACGCTCACAAGGGTGACCCTTGTCTCGTTTTAACGGCTGATCCCAAGCCTCGTCTTCGTTGGACTCAGGACTTGCATGAACGCTTCGTTGATGCGGTCACGCAGCTTGGTGGAGCTAGTAAAGCTACACCAAAAGCAATCATGCGGACTATGAATGTCAAGGGTTTGACTCTGTTTCATTTGAAGAGTCATCTTCAGAAATACAGGCTTGGTAAGCAATCTGGGAAAGATGTGGGCGAAGGATGCAAAGATGGTTCATATCTTTTAGAAAGCCCTGGTGCTGATAACACTTCTCCAAAGTTGCCAACTCCTGATACAAATGAGGGTTATGAAATCAAGGAGGCATTGAGAGCACAGATGGAAGTGCAAAGTAAATTACATTTGCAAGTGGAGGCGGAAAAGCACTTGCAGATTCGCCAGGATGCAGAGAGGAGATACATGGCGATGCTCGAAAGAGCTTGCAAGATGCTGGCTGATCAATTTATCAGTGCTACAGTTATAGACACAGACAGCCAAAAGTTCCAAGGAATTGGAAGCAAAGCACCTAGAGGTACCTTGGTTGATCCTCTTGGTTTTTACTCCTTGCCATCCACTGAGGTAGCCGGAGTGAATGTCCCGGAAGAAGAAATACTGCCAAGTCTCCCACCCCAAAGGGCCGATTGTTCAACCGAAAGTTGTTTAACCTCGCATGAGAGCTCTGGAGGATTGGCTTTAGAAGGATCTCCAGGCGAGGGAAAAAGGAGGATGCTAGGCATGGACTCTATGGCAGCACCTTTGATCTGGAGTGAAGCTAAGATGAGAACTCAAGCCATCAATGTAGCTCAAGGTAATCATCCTCAAGGAATAACTAGGTATGGCATGTAG 945 0.4762 MYPRLIHPHDGIVTQDELQGGAASNLSHAHKGDPCLVLTADPKPRLRWTQDLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDVGEGCKDGSYLLESPGADNTSPKLPTPDTNEGYEIKEALRAQMEVQSKLHLQVEAEKHLQIRQDAERRYMAMLERACKMLADQFISATVIDTDSQKFQGIGSKAPRGTLVDPLGFYSLPSTEVAGVNVPEEEILPSLPPQRADCSTESCLTSHESSGGLALEGSPGEGKRRMLGMDSMAAPLIWSEAKMRTQAINVAQGNHPQGITRYGM* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0150 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 40 100 IPR017930 -
Gso9g0150 314 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 2 314 IPR044848 GO:0003700
Gso9g0150 314 MobiDBLite consensus disorder prediction 245 262 - -
Gso9g0150 314 SUPERFAMILY Homeodomain-like 43 99 IPR009057 -
Gso9g0150 314 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 2 314 - -
Gso9g0150 314 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 43 98 IPR006447 GO:0003677
Gso9g0150 314 Pfam MYB-CC type transfactor, LHEQLE motif 138 183 IPR025756 -
Gso9g0150 314 MobiDBLite consensus disorder prediction 101 132 - -
Gso9g0150 314 MobiDBLite consensus disorder prediction 241 276 - -
Gso9g0150 314 Pfam Myb-like DNA-binding domain 46 96 IPR001005 -
Gso9g0150 314 Gene3D - 42 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0150 Gso-Chr9 1327343 1334134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0150 32 256 G2-like Transcription Factor Family AT3G24120 47.479 2.48e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso9g0150 Myb_DNA-binding 5.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0150 - - gmx:100782369 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1035 15 9784227 9787645 Gso9g0150 9 1327343 1334134 GST