Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0131 ATGTCTTTGTCTGTGGAAGACAACTACTATGGCATGAGCAGCAGTGTGAGTGAGATAGAGGAAGAGAATTCTTCACACTTGCACTTGAATAATGATGGTCCTAATCCTATGGTCACCATTGGTGAAGAAGAGAACGAGGATGATGATGACACTGTTTATGTGGCTGTTGGTAAGAGCCAGAGTAGCACGGAGGCCTTGGCATGGACCCTCAACAACTTGGCCACTCCTTCTACCATGCTCTTTATCATACACGTTTTCCCTGAGATCAAGCTCCTTCCGAATCCATTGGGGGTGGGAATGATTCCAAAGGACCAAGTGAGTCCTGAGCAGGTAGAGAGCTATATGGCTCAAGAAAGAGGCAACAGGAGAGAGCTTCTAAACAAATTCCTCCAATTATGCTCTGCTTCCAAGGTTAAGGTGGACACCATCCTGATTGAGAGTGACCTGATTGCAAAGGCTATCATTGACCTTATTCCAATTCTTCAAATAAAAAAACTAGTGATTGGAGCCAACAAATCCCAAATAAGAAAACTGAGATCAAGGAAAGGGAGTGGCATAGCTGATCAGGTACTTCAGAATGCTCCAGAAAGTTGCAAGGTGAGCATTGTATGTGAAGGAAAAGAAGTGAATGAACAGATAGCTCGTGCCATTACTACTGATCCTTCCATGTCCCAGAAAAACAAGCATCAGCAAAATGCTTCATGTGTTTGTTTCAACTTTTAA 723 0.4329 MSLSVEDNYYGMSSSVSEIEEENSSHLHLNNDGPNPMVTIGEEENEDDDDTVYVAVGKSQSSTEALAWTLNNLATPSTMLFIIHVFPEIKLLPNPLGVGMIPKDQVSPEQVESYMAQERGNRRELLNKFLQLCSASKVKVDTILIESDLIAKAIIDLIPILQIKKLVIGANKSQIRKLRSRKGSGIADQVLQNAPESCKVSIVCEGKEVNEQIARAITTDPSMSQKNKHQQNASCVCFNF* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0131 240 Pfam Universal stress protein family 51 196 IPR006016 -
Gso9g0131 240 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 6 238 - -
Gso9g0131 240 CDD STK_N 51 206 - -
Gso9g0131 240 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 51 198 - -
Gso9g0131 240 MobiDBLite consensus disorder prediction 14 43 - -
Gso9g0131 240 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 6 238 - -
Gso9g0131 240 Gene3D HUPs 44 215 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0131 Gso-Chr9 1139252 1140801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0131 55 207 Plant U-box Gene Family AT5G57035 30.719 1.67e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0131 - - gmx:100777008 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1021 15 9582465 9584589 Gso9g0131 9 1139252 1140801 GST
Gso17g0039 17 468945 470627 Gso9g0131 9 1139252 1140801 PCT