Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0128 ATGAAAACTCCTAAGTACTTAGCCACAATGATTCTGAAATCGGTAGTATGCGTAATTCATATTATCACGATCATATTGGTGATTATAATATGGCCCATGCAAGTAGAGGTATGTGCACAAGAAGATTCAACAACGTGGCCTATAGCAAAGCCTGGGTGTGATTCGGGGTGTGGAGATGTTCCCATTCCTTATCCGTTTGGAATGAACCGTTCGGAATGCTATGCAGGAAAATGGTTTGAAATAGAATGCAGAAACAGTACTAGACCTTACCTCAAGTCTATAGGATTAGGAGTGGAGGTGTTATCCATTGATGTGAATGAAGGCACAGTTGATATCAACAATCCGATTTACCGCAGTAACAACTGTGGAACAAGAACAACCAAACATCCTGCGGTCAACAACATATCGCTGGAAGGAAGCCCTTTCGTGTATTCCCAGAGAAATAACAAATTTGTTGCCGCAGGTTGCAATAACATTGCTTTTCTGAAGGGAAAAGGGTCTGCAGTAAGTGGCTGTGTGTCCATCTGCGACAACGACGATGATGTCGGGAACACCAACCTTGGAAGAATCGAATGCAATGGCGAGTCCTGCTGTGAGAATTCCCTGCCCATGTATCTTTCGGAATATACCCCAGAGATCAAAGGTTTAAATGAGAATAAAAAAGGTAACCACTGCAGTTATGCCATGATTGTAAAAAATAAGCCATATCCATATTCATATCAATATCAATGTCAATATCCATATCAATATCCATATCAATGTCGATATCCATATCAATATCCATATCAATGTCGATATCCATATTCATATCAATATCAATGTCAATATGGGTACTCCAATTTACTTGGTGTTGGCAAACTGAAGGATATAGATTTCGTGCCTGCGGTACTTGAGTGGGAGATTGTGAATGCTACCCTCAAACTCCCTACATCTCCATATGTTGACTGTAAAGTCACTAATATTACATCTTCACGATATAATTACTCTGGTCGGAGATGTTCCTGCAGATATGAAGCAGACTATAATCCTCCTAATCCCTACATTGCTGACGGTTGTCCAGCTGATTATGATGCATATCCTCCTCCGAAACCCACCGGATTAACAAGTCGAGCAAAACAGGCCATAATAGGAGTTTCTGCAAGCCTTGGATCCATCATTTTACTCCTTGTTTTATGGCGAATGGGTAAAGTTGTATGGCGAATTGGTAAAGCTGTAATAAAAACCATACTGCATAAACGCAGAGAAATGTTCTACAAAAAAAATGGGGGATTATTGTTAGAGCAAATGTTGTCTTCTGGTGAAGTTAATGATGATAAAGTTAAACTCTTCAGCTTAAAGGACTTAGAGAAGGCCACCGACAACTTTAATAAGAATAGGGTACTTGGAAAAGGAGGTCAAGGTACTGTTTACAAAGGCATGTTACCAGATGGAAAAATTACTGCAGTGAAAAAATTCAAAGTTGAAGGAAATGTTGAAGAATTCATCAATGAATTTATCATTCTTTCACAAATTAACCACAGAAACGTCGTCAAGTTGTTAGGAAGTTGCTTGGAGACTGAAATTCCCTTGCTTGTTTATGAATTCATTCCTAATGGTAACCTTTTTGAGTATTTGCATGGACAAAATGAGGATTTTCCAATGACATGGGATATTCGTTTGAGAATTGCCACTGAAGTTGCAGGAGCTTTATTTTACTTACACTTGGCTGCTTCTCGACCTATTTATCACAGAGACATCAAGTCAACAAATATACTATTGGATGAAAAGTATAGGGCAAAAGTAGCAGACTTTGGTACATCAAGAATGGTTACTATTGATGCTACTCACCTCACCACAGTAGTTCAAGGAACATTTGGATACTTGGACCCTGAATATTTTCATACTAGTCAATTTACAGAAAAAAGTGATGTCTACAGCTTTGGAGTAGTTCTCGTTGAACTCTTAACAGGGAAAAAGCCAATATCCCTCCTAAATCCAGAGGAAGCCAAGAGTTTAGCTTCATCTTTCATTCTTTGTTTGGAGGAAAATCGTCTGTTTGATATTGTTGATGAAAGAGTTGTGAAGGAGGGGGAGAAAGAACATATCATGGCAGTTGCCAATCTTGCAAGTAGATGTTTAGAGTTGAATGGGAAAAAACGACCAACTATGAAGGAAGTCACATTGGAATTAGAAGGAATTCGAAAATTGGAAGGGAAGTCTAATACACAAGAAAGACATGACGATAATGAACTTGAGCATGTTCCAATTGGAGACTATCAATCTTGGACTGAGTATTCTACTGCCTCAAATATAAGCTCAACTCTTGATCTAAATAACAGAACACCAACCTTGGAGGATATTCATATTCATACCATTTAA 2358 0.3855 MKTPKYLATMILKSVVCVIHIITIILVIIIWPMQVEVCAQEDSTTWPIAKPGCDSGCGDVPIPYPFGMNRSECYAGKWFEIECRNSTRPYLKSIGLGVEVLSIDVNEGTVDINNPIYRSNNCGTRTTKHPAVNNISLEGSPFVYSQRNNKFVAAGCNNIAFLKGKGSAVSGCVSICDNDDDVGNTNLGRIECNGESCCENSLPMYLSEYTPEIKGLNENKKGNHCSYAMIVKNKPYPYSYQYQCQYPYQYPYQCRYPYQYPYQCRYPYSYQYQCQYGYSNLLGVGKLKDIDFVPAVLEWEIVNATLKLPTSPYVDCKVTNITSSRYNYSGRRCSCRYEADYNPPNPYIADGCPADYDAYPPPKPTGLTSRAKQAIIGVSASLGSIILLLVLWRMGKVVWRIGKAVIKTILHKRREMFYKKNGGLLLEQMLSSGEVNDDKVKLFSLKDLEKATDNFNKNRVLGKGGQGTVYKGMLPDGKITAVKKFKVEGNVEEFINEFIILSQINHRNVVKLLGSCLETEIPLLVYEFIPNGNLFEYLHGQNEDFPMTWDIRLRIATEVAGALFYLHLAASRPIYHRDIKSTNILLDEKYRAKVADFGTSRMVTIDATHLTTVVQGTFGYLDPEYFHTSQFTEKSDVYSFGVVLVELLTGKKPISLLNPEEAKSLASSFILCLEENRLFDIVDERVVKEGEKEHIMAVANLASRCLELNGKKRPTMKEVTLELEGIRKLEGKSNTQERHDDNELEHVPIGDYQSWTEYSTASNISSTLDLNNRTPTLEDIHIHTI* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0128 785 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 47 773 - -
Gso9g0128 785 Pfam Protein kinase domain 455 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0128 785 Gene3D Transferase(Phosphotransferase) domain 1 529 750 - -
Gso9g0128 785 SMART serkin_6 455 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0128 785 Gene3D Phosphorylase Kinase; domain 1 427 528 - -
Gso9g0128 785 CDD STKc_IRAK 461 726 - -
Gso9g0128 785 ProSiteProfiles Protein kinase domain profile. 455 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0128 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 574 586 IPR008271 GO:0004672|GO:0006468
Gso9g0128 785 SUPERFAMILY Protein kinase-like (PK-like) 439 723 IPR011009 -
Gso9g0128 785 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 47 773 IPR045274 GO:0007166
Gso9g0128 785 Pfam Wall-associated receptor kinase galacturonan-binding 53 113 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0128 Gso-Chr9 1108338 1115882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0128 28 764 Receptor kinase-like Gene Family AT1G16260 40.479 1.38e-170 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Gso9g0128 Pkinase 9.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0128 - - gsj:114368715 1479.54