Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0126 ATGGGTGAACAATTAGGGCTACTAAAAGTCATGGTTGTGCAAGGGAAAAGGTTGGTGATCCGGGATTTCAAGACCAGTGATCCTTATGTAGTACTCAAACTAGGGAATCAGACTGCAAAGACCAAGGTAATTAATAGCTGCTTGAATCCTGTTTGGAATGAAGAGCTGAATTTCACTCTGACAGAACCATTGGGAGTTCTGAATTTGGAAGTGTTTGATAAAGATCTTTTGAAGGCTGATGACAAGATGGGAAATGCTTTCTTGAACCTTCAACCAATAGTCTCTGCAGCCAGATTAAGAGACATCTTAAGAGTGTCCTCTGGTGAGACAACATTAAGGAAGGTCATACCTGATGGTGAAAACTGTCTTGTCCGTGAAAGCAGTATCAACTGTGTCAATGGTGAGGTGGTGCAGAATGTTTGGTTAAGGCTTCGTGGAGTTGAGTCTGGGGAACTAGAATTGACTATCAAGTTGGCCACACCTGTTGCTCCTGCAATATAG 501 0.4251 MGEQLGLLKVMVVQGKRLVIRDFKTSDPYVVLKLGNQTAKTKVINSCLNPVWNEELNFTLTEPLGVLNLEVFDKDLLKADDKMGNAFLNLQPIVSAARLRDILRVSSGETTLRKVIPDGENCLVRESSINCVNGEVVQNVWLRLRGVESGELELTIKLATPVAPAI* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0126 166 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Gso9g0126 166 Pfam C2 domain 7 99 IPR000008 -
Gso9g0126 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 11 1 161 - -
Gso9g0126 166 Gene3D C2 domain 3 162 IPR035892 -
Gso9g0126 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 158 IPR035892 -
Gso9g0126 166 PRINTS C2 domain signature 22 34 IPR000008 -
Gso9g0126 166 PRINTS C2 domain signature 46 59 IPR000008 -
Gso9g0126 166 PRINTS C2 domain signature 67 75 IPR000008 -
Gso9g0126 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 161 IPR044562 -
Gso9g0126 166 CDD C2_ArfGAP 5 150 - -
Gso9g0126 166 SMART C2_3c 7 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0126 Gso-Chr9 1099656 1102417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0126 1 157 C2H2 Transcription Factor Family AT4G21160 43.312 1.85e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0126 - - gmx:100499880 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1016 15 9546796 9549445 Gso9g0126 9 1099656 1102417 GST
Gso7g2274 7 46360197 46361662 Gso9g0126 9 1099656 1102417 PCT