Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0120 ATGGACCTCTTCGCCGGCGACCACTTCCCTGTCCCCGACCACGTCGCTCCGTTCCCCGATTCCGGCGACCTCGTCTTCGCCGCCGACCTCCTCTCCCACCGCCCCAACCCCCAGAAGCTCCGCCCTATCAGGTCCGTCCCCGCCGCCCCCATTGCCCACCCTCCTCCGCCCCCTCTCTCGCACGATCCGATTCCCTCCGGGTCGGGTCACGCCCCATGCCACGAATCCAGCTCGTCTTTAGATGCTGAGGATGAAGACGATGACGACAATTCATCAGCAAGTACGGAAGGACATGGCCCTATAAAGAAGAGGAGAAAGACGGTGAGGAAGCTCGAAGATTTTTTGAAGGATTTGATGGCGAAGGTGATGGAAAAGCAAGAGCAGATGCACGAACAGTTATTGGAAATCATAGAAAATAAGGAAAGGGAAAGGATAAAGAGAGAAGAAGCTTGGAAGAACGAGGAGATGGAGAGAATCAGAAAAGATGAAGAGGCTAGAGCCCAAGTAAATTCTCGAAATTTGGCCCTCATATCCTTCATTCAGAACCTGTTGGGCCATGAAATTCAAATCCCCCAACAACCAGTAGAACCATGCAGCAAAAGAGAAGAGGATGAAGTTGAGGTGAGTGCTAGAAAGGATTTGAACAATGATCCAAGTGACAATAATAGATGGCCTGATGTTGAAGTGCAGGCACTGATCACTGTGAGAACTTCATTGGAGCACAAGTTTCGTTTCATGGGATCAAAAGGGTCAATATGGGAGGAGATATCTGAAGCAATGAATGGCATGGGGTACAACCGCTCTTCAAAGAAGTGTAAGGAGAAGTGGGAAAACATTAACAAGTACTATAAAAGGACAATAGGGAGTGGCAAGAAAAGGCGTCAAAACAGTAAAACTTGCCCTTACTTTGATGAGTTGGACATTTTGTATAGAAATGGTCTTCTAAGTATTGGAAATGCCTTGAGCAATACCAGCGATGTTCCCCAGATTGAAGTAAAGGAGTTGACTGAAACTTGA 1017 0.4818 MDLFAGDHFPVPDHVAPFPDSGDLVFAADLLSHRPNPQKLRPIRSVPAAPIAHPPPPPLSHDPIPSGSGHAPCHESSSSLDAEDEDDDDNSSASTEGHGPIKKRRKTVRKLEDFLKDLMAKVMEKQEQMHEQLLEIIENKERERIKREEAWKNEEMERIRKDEEARAQVNSRNLALISFIQNLLGHEIQIPQQPVEPCSKREEDEVEVSARKDLNNDPSDNNRWPDVEVQALITVRTSLEHKFRFMGSKGSIWEEISEAMNGMGYNRSSKKCKEKWENINKYYKRTIGSGKKRRQNSKTCPYFDELDILYRNGLLSIGNALSNTSDVPQIEVKELTET* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0120 338 MobiDBLite consensus disorder prediction 48 63 - -
Gso9g0120 338 Gene3D - 224 285 - -
Gso9g0120 338 Coils Coil 108 143 - -
Gso9g0120 338 ProSiteProfiles Myb-like domain profile. 216 280 IPR001005 -
Gso9g0120 338 PANTHER - 72 329 - -
Gso9g0120 338 MobiDBLite consensus disorder prediction 47 104 - -
Gso9g0120 338 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 72 329 - -
Gso9g0120 338 SMART sant 220 282 IPR001005 -
Gso9g0120 338 CDD GT1 222 286 - -
Gso9g0120 338 Pfam Myb/SANT-like DNA-binding domain 222 307 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0120 Gso-Chr9 1043620 1045800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0120 102 312 Trihelix Transcription Factor Family AT5G47660 45.089 1.69e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso9g0120 Myb_DNA-bind_4 3.8e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0120 - - gmx:100820302 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g1001 15 9308119 9310371 Gso9g0120 9 1043620 1045800 GST