Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0116 ATGGGCAATGCCAATGGGAGAGACGATGTGAACGGTACTCCATCCGGAACCGAAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACGACGGAGAAGAAGGTGGTTCTGACAGTGTCACCGATTGCATGTCTTCCAATCCTTCTCACCATGCGCCCTCGGAGTTGATGGGTCATTCTCCCCCTGCTAGCCCTAGAGCTACCCAATCTCCATTCATGTTCACCCCACAAGTTCCGGTGGTTCCGCTACAAAAACCTGATGAGATGCATGCTCCAAGCCCTTCCTGGATGCAGACTACGTCAGTTTATGAGGATATGTACTGTGAACTGGGAATTCCAACGATGATTACTTGGAGCTATGATGGGAAGGAAGTTGCCGTGGAGGGTTCGTGGGATAATTGGAAAACAAGAATGCCTTTACAGAGATCAGGGAAGGACTTCACAATAATGAAGGTGCTGCCATCTGGTGTATACCAATTTAGATTTATTGTGGATGGACAGTGGAGGTACGCACCTGACTTGCCTTGGGCTCAAGATGATTCAGGGAATGCTTACAACGTTTTGGACTTGCAGGATTATGTTCCTGAAGACATTGGAAGCATTTCTAGTTTTGAACCTCCTCAATCACCAGACTCTAGCTATAACAACTTGCAACTTAGTTCTGAAGATTATGCAAAGGAGCCGCCATTGGTTCCTCCATATTTACAAATGACGCTTCTTAACGTTCCGTCAACAAATATGGAAGTCCAACCTCTTACATCCAGACCTCAGCATGTAGTGCTCAATCATCTTTACATGCAGAAAGGAAAGGGTAGCCCTTCAGTGGTTGCACTTGGTACAACTCAACGGTTTGTAGCCAAATATGTGACTGTGGTGCTGTACAAGTCTTTGCAGAGGTAA 912 0.4583 MGNANGRDDVNGTPSGTEGEEEEEEEEEEEEEEDDGEEGGSDSVTDCMSSNPSHHAPSELMGHSPPASPRATQSPFMFTPQVPVVPLQKPDEMHAPSPSWMQTTSVYEDMYCELGIPTMITWSYDGKEVAVEGSWDNWKTRMPLQRSGKDFTIMKVLPSGVYQFRFIVDGQWRYAPDLPWAQDDSGNAYNVLDLQDYVPEDIGSISSFEPPQSPDSSYNNLQLSSEDYAKEPPLVPPYLQMTLLNVPSTNMEVQPLTSRPQHVVLNHLYMQKGKGSPSVVALGTTQRFVAKYVTVVLYKSLQR* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0116 303 Pfam Glycogen recognition site of AMP-activated protein kinase 116 195 IPR032640 -
Gso9g0116 303 MobiDBLite consensus disorder prediction 15 41 - -
Gso9g0116 303 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 229 299 IPR006828 GO:0005515
Gso9g0116 303 Gene3D - 204 301 - -
Gso9g0116 303 CDD E_set_AMPKbeta_like_N 117 193 - -
Gso9g0116 303 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-2 1 303 - -
Gso9g0116 303 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 303 IPR043554 -
Gso9g0116 303 MobiDBLite consensus disorder prediction 43 57 - -
Gso9g0116 303 SUPERFAMILY AMPKBI-like 198 300 IPR037256 -
Gso9g0116 303 SMART AMPKBI_2 211 301 IPR006828 GO:0005515
Gso9g0116 303 MobiDBLite consensus disorder prediction 1 76 - -
Gso9g0116 303 Gene3D Immunoglobulins 113 198 IPR013783 -
Gso9g0116 303 SUPERFAMILY E set domains 116 201 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0116 Gso-Chr9 1015752 1019070 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0116 K07199 - gmx:100811585 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0997 15 9285204 9288204 Gso9g0116 9 1015752 1019070 GST
Gso17g0046 17 542919 545503 Gso9g0116 9 1015752 1019070 PCT