Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0097 ATGCAAACTTCTAAGAAGCACCCAACTTCAGCTGGTATCCATTTATACCTGCAGCCTGCACAAGATATTGATCCTTACACTCATTACCAAATATTGCAAAGCAATTCATGCCATGATAATAGCAGCAGCCAGGGAACCACTATTTCTTTTGAAACCAGCAAGGAGCAATACTTTACCCTTGAATCATCCCCAGCAATCAATGATCTCATAGGTTGTGATTCTCCTTCCTATGCTAGTGTATCATCCAATAGGAGTCCTTTTTCTCCACAAGCTTCTCATTCAGACCAGCATCAGTCATCAGACAACACCTATGGATCACCAACAAGTGCACACTCTAGATATGATGATGACGGCTACGAATTGAAGAACAAGCTTAGAGAACTCGAGATTTCGTTGTTGGGGCCTGATTCAGACATTGTTGATAGTTGGCACTGCTCCTACAAGGGTGGCCGCCACAGAGCATCATCTCCAACGGCTAAACACAATTGGGATCAGATTGTGGAAATGATTCCAAAATTAGACTTGAAAGAAGTCCTCATTCGGTGTGCACAAGCCGTGGCAGATGATGATATTGAAACAGCAGTGGGATTTATGAACAATGTATTGGCAAAGATGGTATCAGTTGGGGGTGATCCGATCCAGAGGTTAGGTGCCTACATGTTGGAGGGTCTAAGAGCAAGGTTGGAGTCCTCAGGGAGCATAATCTACAAGGCCTTGAAATGTGAACAACCAACAAGCAATGATCTCATGACTTACATGCACATCCTGTACCAGATTTGCCCATATTGGAAGTTTGCTTACACATCTGCAAATGCTGTCATTGGAGAAGCAATGCTGAATGAATCAAGAATTCACATAATTGACTTCCAAGTTGCACAGGGCACTCAGTGGCTGTTGCTTATTCAGGCTCTTGCATCTCGTCCAGGTGGAGCACCTTTCATTCGTGTAACCGGAGTTGATGATTCACAATCATTTCATGCAAGGGGTGGAGGACTTCACATTGTAGGAAAACGCCTCTCAGATTATGCCAAATCTTGTGGAGTTCCATTTGAGTTCCACAGTGCTGCTATGTGTGGAAGTGAGCTTGAACTAGAAAACCTTGTAATTCAACCCGGGGAAGCTCTAGTTGTGAACTTCCCTTTTGTTTTGCACCACATGCCAGATGAGAGTGTGAGCACAGAGAACCATAGGGACAGGCTATTGAGACTGGTCAAAAGCTTGTCACCCAAGGTTGTGACCCTTGTTGAGCAAGAATCCAACACCAACACTTCTCCCTTTTTCCAAAGGTTTGTTGAGACCTTGAGTTACTACACTGCTATGTTTGAGTCCATAGATGTGGCCCTCCCCAGAGATGATAAGCAAAGGATCAATGCAGAACAACACTGCGTGGCTCGCGACATCGTCAACATGGTAGCTTGTGAGGGGGATGAGAGGCTGGAAAGGCATGAACTCTTAGGGAAGTGGAGGTCAAGATTTTCAATGGCTGGTTTTGCACCATGCCCTTTGAGTTCCTCAGTCACAGCTGCAGTTAGGAATATGTTGAATGAATTCAATGAAAATTATAGGCTTCAACATAGAGATGGCGCTCTTTATCTAGGATGGAAGAGTAGAGCTATGTGTACCTCTTCTGCTTGGAGATGTTACTGA 1647 0.4444 MQTSKKHPTSAGIHLYLQPAQDIDPYTHYQILQSNSCHDNSSSQGTTISFETSKEQYFTLESSPAINDLIGCDSPSYASVSSNRSPFSPQASHSDQHQSSDNTYGSPTSAHSRYDDDGYELKNKLRELEISLLGPDSDIVDSWHCSYKGGRHRASSPTAKHNWDQIVEMIPKLDLKEVLIRCAQAVADDDIETAVGFMNNVLAKMVSVGGDPIQRLGAYMLEGLRARLESSGSIIYKALKCEQPTSNDLMTYMHILYQICPYWKFAYTSANAVIGEAMLNESRIHIIDFQVAQGTQWLLLIQALASRPGGAPFIRVTGVDDSQSFHARGGGLHIVGKRLSDYAKSCGVPFEFHSAAMCGSELELENLVIQPGEALVVNFPFVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFVETLSYYTAMFESIDVALPRDDKQRINAEQHCVARDIVNMVACEGDERLERHELLGKWRSRFSMAGFAPCPLSSSVTAAVRNMLNEFNENYRLQHRDGALYLGWKSRAMCTSSAWRCY* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0097 548 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 20 545 IPR005202 -
Gso9g0097 548 MobiDBLite consensus disorder prediction 80 116 - -
Gso9g0097 548 Pfam GRAS domain family 175 546 IPR005202 -
Gso9g0097 548 ProSiteProfiles GRAS family profile. 166 546 IPR005202 -
Gso9g0097 548 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 20 545 - -
Gso9g0097 548 MobiDBLite consensus disorder prediction 80 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0097 Gso-Chr9 871656 875485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0097 1 546 GRAS Transcription Factor Family AT4G17230 59.199 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso9g0097 GRAS 2.7e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0097 - - gmx:100817987 1105.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0979 15 9113490 9117433 Gso9g0097 9 871656 875485 GST
Gso7g2260 7 46211847 46215447 Gso9g0097 9 871656 875485 PCT
Gso17g0060 17 638286 641657 Gso9g0097 9 871656 875485 PCT