Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0073 ATGGCAGGGTCATGTTTCCACGGGCTTAGGCTAAGGATGTCTAAGAGTAAAGCTTTAGCGGAGCCTTCATCTTCTTCCAAGACCCAGTTGGAGAGTGACGCGGAGAACGTGGAAAGGAAGAGATTTGATAGCATGGAATCGTGGTCATTGATATTCGACTCAATGGAGACATGGGAGACTTCAAAGGAGGACCAGAAAGGGGAGCAAGAGGAATGGGCTGCAGACCTGTCACAGCTTTTTATAGGTAGCAAGTTTGCTTCTGGAGCTCACAGCCGAATTTACCGTGGAGTCTACAAGCAGAGAGCTGTTGCTGTGAAAATGGTGAAGATTCCAACTCAGGATGAGGAGAAAAAGGCCTTACTGGAGGAGCAATTTAACTTTGAAGTGGCTTTGCTTTCACGTCTCATTCATCATAACATAGTGCAGTTTATTGCAGCATGTAAAAAACCGCCCGTATACTGTATCATAACAGAATACATGTCACAAGGGACTCTGAGGATGTATCTAAACAAGAAAGAGCCGTACTCACTCTCAATTGAAACAATACTAAGGTTAGCTCTAGATATATCAAGGGGTATGGAGTACCTTCATTCACAAGGTGTGATTCACAGAGACCTCAAGTCAAGTAATTTGCTTCTCGACGATGACATGAGAGTTAAGGTGGCGGATTTTGGCACATCTTGTCTTGAAACAAGATGCCGGAAAGGCAAAGGAAACTCGGGAACATATCGTTGGATGGCACCGGAGATGGTTAAGGAAAAACCTTATACTCGGAAGGTTGATGTGTACAGTTTTGGTATTGTGCTTTGGGAGCTCACAACTTCTCTGCTTCCCTTCCAAGGAATGACACCAGTGCAAGCTGCTTTTGCTGTGGCTGAGAAGAATGAAAGGCCTCCTCTGCCAGCTAGTTGTCAACCAGCACTAGCACATCTGATAAAGCGTTGCTGGTCAGCAAACCCCTCAAAAAGGCCAGATTTCAGTGATATTGTGTCTACTTTGGAGAAGTACGATGAGTGTGTGAAAGAGGGCCTGCCACTGAGTCATAATCATTCAGGGCTAGTCAGCAGAAATGTAATTATTGAACGCCTAAAAGGCTGTGTATCAATGAGCTCCTCCATACCTGTACATGCTTGA 1134 0.4497 MAGSCFHGLRLRMSKSKALAEPSSSSKTQLESDAENVERKRFDSMESWSLIFDSMETWETSKEDQKGEQEEWAADLSQLFIGSKFASGAHSRIYRGVYKQRAVAVKMVKIPTQDEEKKALLEEQFNFEVALLSRLIHHNIVQFIAACKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSIETILRLALDISRGMEYLHSQGVIHRDLKSSNLLLDDDMRVKVADFGTSCLETRCRKGKGNSGTYRWMAPEMVKEKPYTRKVDVYSFGIVLWELTTSLLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWSANPSKRPDFSDIVSTLEKYDECVKEGLPLSHNHSGLVSRNVIIERLKGCVSMSSSIPVHA* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0073 377 Gene3D Transferase(Phosphotransferase) domain 1 162 355 - -
Gso9g0073 377 Pfam Protein tyrosine and serine/threonine kinase 81 333 IPR001245 GO:0004672|GO:0006468
Gso9g0073 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Gso9g0073 377 ProSiteProfiles Protein kinase domain profile. 79 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0073 377 SMART serkin_6 79 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0073 377 PRINTS Tyrosine kinase catalytic domain signature 157 170 IPR001245 GO:0004672|GO:0006468
Gso9g0073 377 PRINTS Tyrosine kinase catalytic domain signature 195 213 IPR001245 GO:0004672|GO:0006468
Gso9g0073 377 PRINTS Tyrosine kinase catalytic domain signature 241 251 IPR001245 GO:0004672|GO:0006468
Gso9g0073 377 PRINTS Tyrosine kinase catalytic domain signature 260 282 IPR001245 GO:0004672|GO:0006468
Gso9g0073 377 PRINTS Tyrosine kinase catalytic domain signature 304 326 IPR001245 GO:0004672|GO:0006468
Gso9g0073 377 CDD STKc_MAP3K-like 86 333 - -
Gso9g0073 377 SUPERFAMILY Protein kinase-like (PK-like) 53 333 IPR011009 -
Gso9g0073 377 MobiDBLite consensus disorder prediction 15 39 - -
Gso9g0073 377 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 9 365 - -
Gso9g0073 377 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 365 - -
Gso9g0073 377 Gene3D Phosphorylase Kinase; domain 1 68 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0073 Gso-Chr9 690492 695423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0073 1 377 MAP Kinase Kinase Kinase AT1G62400 76.650 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gso9g0073 PK_Tyr_Ser-Thr 1.4e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0073 - - gmx:100810171 750.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0955 15 8917481 8923133 Gso9g0073 9 690492 695423 GST
Gso7g2245 7 46075412 46079844 Gso9g0073 9 690492 695423 PCT
Gso17g0075 17 745613 750331 Gso9g0073 9 690492 695423 PCT