Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0055 ATGGCTCGTCCTAGTTTCCCTCTTGCTCTCTGTTTCTCTTTCATCTTCGTTGCTCTTCCTCTTTCCCTCGCCACCACTGACCCTTCTGATGTTCAAGCTCTTGAGGTCATGTACAATGTGTTGAATAGTCCAACTCAGCTAACGGGTTGGAAAATCGGTGGTGGTGATCCATGTGGAGAGTCATGGAAAGGGGTAACGTGTGAGGGATCAGCCGTTGTTTCCATTAAACTCTCAGGTTTAGGACTCGATGGGACTCTGGGGTACTTGCTTTCAGACCTTATGTCACTCAGAGACCTTGACTTAAGTGATAACAAGATCCATGATACAATTCCCTACCAGTTGCCGCCCAATCTTACAAGCCTGAATTTTGCAAGAAATAATTTATCTGGAAATCTTCCTTATTCCATTTCTGCCATGGGTTCACTCAATTATTTGAATTTAAGCAATAATGCACTCTCCATGACAGTTGGTGATATATTTGCTAGTCTTCAAGATCTTGGCACCCTGGATCTATCATTCAATAACTTCTCTGGGGATCTTCCTCCTTCAGTTGGTGCATTGGCCAATCTTTCTTCTCTTTTCTTGCAGAAGAACCAGTTGACTGGTTCTCTTAGTGCTCTCGTTGGTTTGCCTTTGGATACTTTAAATGTTGCAAACAATAATTTCAGTGGATGGATACCCCATGAGCTTAGTTCCATCCATAATTTCATATACGATGGAAATTCTTTTGAGAACCGTCCTGCTCCTCTTCCGCCGACAGTTACTTCACCTCCTCCCAGTGGATCTCATAGACGTCATCATTCTGGATCTGGTTCACATAATAAAACACAAGCTTCTGATAATGAAAAATCTAATGGCCATAAGGGTTTGACAGTGGGGGCTGTCATAGGCATTGTTTTAGGTTCAGTACTGGTGGCTGCTATTGTGTTCCTTGCTCTTGTTTTCTGTATCCGAAAGCAAAAGGGGAAGAAAAAGGGTGCAAGAAATTTTAGTGGGAGCCTTCCTCGTGGAGTTATTAATGTAACTCCTCAGATGCAAGAGCAGAGGGTAAAAAGTGCTGCTGTTGTTACAGATCTCAAGCCTCGTCCAGCAGAAAATGTGACAGTTGAGAGGGTAGCTGTAAAAAGTGGATCTGTAAAGCAGATGAAATCCCCTATAACTTCTACATCATACACAGTTGCTTCTCTCCAAAGTGCAACAAATAGCTTTAGTCAAGAATTTATTATTGGTGAAGGTTCTCTTGGCCGAGTTTACAGGGCTGATTTTCCAAATGGAAAGGTAATGGCTATTAAGAAGATCGACAACTCAGCTTTGTCATTACAGGAGGAAGACAATTTTCTTGAAGCTGTTTCAAATATGTCACGCTTGCGGCACCCAAACATTGTGACATTGGCTGGATATTGTGCAGAGCATGGCCAACGACTTCTAGTTTATGAGTATATAGCAAATGGAAATCTGCATGACATGCTCCATTTTGCTGAAGATAGCAGCAAGGATTTGTCTTGGAATGCCCGTGTACGCATAGCACTTGGCACAGCCCGGGCTTTAGAGTACCTGCATGAAGTGTGCTTGCCTTCTGTTGTACATAGAAATTTCAAATCTGCAAATATATTACTTGATGAGGAGCTCAATCCTCACCTGTCTGACTGTGGTTTAGCTGCTTTGACACCAAACACTGAGCGGCAGGTATCAACTCAGATGGTCGGTTCATTTGGTTATAGTGCTCCTGAGTTTGCATTATCTGGAGTATACACTGTAAAAAGTGATGTTTACAGCTTTGGGGTGGTTATGCTGGAACTATTGACTGGTCGGAAGCCACTTGACAGTTCACGGGTTCGATCAGAGCAGTCACTTGTGAGGTGGGCTACACCACAACTCCATGATATAGATGCCTTGGCCAAAATGGTTGATCCTACTTTGAACGGCATGTATCCTGCAAAGTCACTGTCACGCTTTGCTGATATCATTGCCCTCTGTGTTCAGCCGGAACCCGAATTTCGACCTCCGATGTCTGAGGTGGTGCAAGCATTGGTTCGGTTAGTGCAAAGAGCAAGTGTGGTTAAAAGACGACCAAGTGAGGAATCTGGTTTTGGTCACAAGACCCCAGACCATGATGCCATGGACATGTCATTTTAA 2136 0.4359 MARPSFPLALCFSFIFVALPLSLATTDPSDVQALEVMYNVLNSPTQLTGWKIGGGDPCGESWKGVTCEGSAVVSIKLSGLGLDGTLGYLLSDLMSLRDLDLSDNKIHDTIPYQLPPNLTSLNFARNNLSGNLPYSISAMGSLNYLNLSNNALSMTVGDIFASLQDLGTLDLSFNNFSGDLPPSVGALANLSSLFLQKNQLTGSLSALVGLPLDTLNVANNNFSGWIPHELSSIHNFIYDGNSFENRPAPLPPTVTSPPPSGSHRRHHSGSGSHNKTQASDNEKSNGHKGLTVGAVIGIVLGSVLVAAIVFLALVFCIRKQKGKKKGARNFSGSLPRGVINVTPQMQEQRVKSAAVVTDLKPRPAENVTVERVAVKSGSVKQMKSPITSTSYTVASLQSATNSFSQEFIIGEGSLGRVYRADFPNGKVMAIKKIDNSALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYIANGNLHDMLHFAEDSSKDLSWNARVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGVYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQLHDIDALAKMVDPTLNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSEESGFGHKTPDHDAMDMSF* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0055 711 Gene3D Phosphorylase Kinase; domain 1 364 480 - -
Gso9g0055 711 MobiDBLite consensus disorder prediction 691 711 - -
Gso9g0055 711 MobiDBLite consensus disorder prediction 247 286 - -
Gso9g0055 711 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 8 24 706 - -
Gso9g0055 711 MobiDBLite consensus disorder prediction 272 286 - -
Gso9g0055 711 SUPERFAMILY Protein kinase-like (PK-like) 381 677 IPR011009 -
Gso9g0055 711 ProSiteProfiles Leucine-rich repeat profile. 95 116 IPR001611 GO:0005515
Gso9g0055 711 Gene3D Transferase(Phosphotransferase) domain 1 481 697 - -
Gso9g0055 711 CDD STKc_IRAK 409 680 - -
Gso9g0055 711 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Gso9g0055 711 ProSiteProfiles Protein kinase domain profile. 403 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0055 711 SUPERFAMILY L domain-like 26 235 - -
Gso9g0055 711 Gene3D Ribonuclease Inhibitor 27 280 IPR032675 -
Gso9g0055 711 PANTHER OS01G0253100 PROTEIN 24 706 IPR045271 GO:0004714|GO:0006468
Gso9g0055 711 Pfam Protein kinase domain 406 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0055 Gso-Chr9 493502 500240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0055 139 711 Strubbelig Receptor Gene Family AT4G22130 71.080 0.0 817
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gso9g0055 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0055 - - gmx:100781455 1326.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0938 15 8715396 8722307 Gso9g0055 9 493502 500240 GST