Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0052 ATGGATATGCAAGCATCAAATGAATTTCTTGCAGAATTGAAGGTTCTGACACACGTCCATCACTTGAACTTGGAGCGGTTAATAAGATATTGTGTTGAGGGCTCCTTATTTTTGGTTTATGAGTACATTGAGAACGGCTATTTAAGTCAACATTTGCGAGGCTCAGGAAGGGATCCGTTAACATGGGCAGCTAGAGTTCAAATTGCTCTTGATGCAGCAAGAGGACTGGAATATATCCATGAGCACACAGTTCCTGTCTACATCCATAGAGATATTAAATCAGCAAACATTTTGATTGACAAAAACTTCCGTGCAAAGGTTGCAGATTTTGGTCTCACAAAATTGACCGAATATGGTAGTTCTTCATTACATACGCGTCTTGTGGGTACATTTGGTTATATGCCTCCAGAATATGCACAATACGGTGATGTGTCCTCCAAAATAGATGTATATGCTTTTGGAGTTGTTCTCTATGAACTCATATCAGGCAAGGAAGCTATTGTCAAGATAAACGAACCTGAAAATGAATCAAAAGGACTAGTCTCCTTGTTTGAAGAAGTTCTTGGTCTGTCAGACCCGAATGAAGATCCTCGTCAACTTGTTGATCCTAGACTCTGTGACAAATTCCCTCTTGACTCGGTATTTAAGGTGTCTCAGCTTGCCAAAGTATACACATGA 678 0.3997 MDMQASNEFLAELKVLTHVHHLNLERLIRYCVEGSLFLVYEYIENGYLSQHLRGSGRDPLTWAARVQIALDAARGLEYIHEHTVPVYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGSSSLHTRLVGTFGYMPPEYAQYGDVSSKIDVYAFGVVLYELISGKEAIVKINEPENESKGLVSLFEEVLGLSDPNEDPRQLVDPRLCDKFPLDSVFKVSQLAKVYT* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0052 225 Gene3D Transferase(Phosphotransferase) domain 1 44 224 - -
Gso9g0052 225 ProSitePatterns Serine/Threonine protein kinases active-site signature. 87 99 IPR008271 GO:0004672|GO:0006468
Gso9g0052 225 SMART serkin_6 1 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0052 225 Gene3D Phosphorylase Kinase; domain 1 1 43 - -
Gso9g0052 225 SUPERFAMILY Protein kinase-like (PK-like) 3 172 IPR011009 -
Gso9g0052 225 ProSiteProfiles Protein kinase domain profile. 1 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0052 225 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 1 223 IPR044812 GO:0019199|GO:0045087
Gso9g0052 225 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 1 223 - -
Gso9g0052 225 Pfam Protein tyrosine and serine/threonine kinase 4 172 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0052 Gso-Chr9 470274 472759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0052 1 225 Receptor kinase-like Gene Family AT3G21630 68.889 1.92e-106 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gso9g0052 PK_Tyr_Ser-Thr 9.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0052 - K13429 gmx:100806955 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0935 15 8685946 8693820 Gso9g0052 9 470274 472759 GST