Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0034 ATGAAGAACAAGAAGGGTGAAGCTCTGAGTGAGACTTCTCTCCCACCTTCAACCATGTCTTCTTCCTCCTCTTCTCTTGTCACCACTCTTGTTGATAATAATAACCCTACTCAACCTTCTCAGTTAAGAGCGGCACGCCGTCGTTTCACCTCTGATCATCACCTTCCTGAGATAAGCCTCAAAACCCCTATGGTTAGGCCTTATGTTCGATCAAAAATGCCTAGGCTTCGTTGGACACCAGATCTCCATCGTTGCTTCGTGCATGCAGTTCAAAGACTTGGAGGAGAAGACAGGGCCACACCAAAGTTGGTTTTACAGCTCATGAATGTAAAGGGGCTTACTATATCTCACGTCAAAAGCCACCTTCAGATGTACAGGAGCATGAGACACGAGCAGATGAGTCAAGGTGCAAAGAAGAATAATATGGCTCCGGATTTCCCAGCTTCCACACTCGCAACTCTTGGCCCAAGGCAACAGAAACCTCACAAAAGAAGCTGCACGGAAGAGCTTGTTCCCACCCAAGCTCAATGGAATCATGATGAGCAAGAGTGTTACAATGGAAACCAAGGGGGTGAATCGATTATAATTTGTAACGGCAATGAACAGAAGGTGCACTCCTACATCATCTTCGAGGGTCTTCTGAGAGGCCAGTCTGTCCAAGAGAATAAAACTACTACTACTGAAAAGGTGTCACTAGGTGATGCCGGTTACGAAAGCGACCATCAAAGATTCCAAGACACAACTCTGTCCCTTTCAATGAGCTCAAGGCCTTCTTCACATTCGTTCTTGAATCGGAGCCACAGTACTGGTCCAGATGCGAATGATGTCTCTCTTGAGCTCACGCTCTCTTAG 852 0.466 MKNKKGEALSETSLPPSTMSSSSSSLVTTLVDNNNPTQPSQLRAARRRFTSDHHLPEISLKTPMVRPYVRSKMPRLRWTPDLHRCFVHAVQRLGGEDRATPKLVLQLMNVKGLTISHVKSHLQMYRSMRHEQMSQGAKKNNMAPDFPASTLATLGPRQQKPHKRSCTEELVPTQAQWNHDEQECYNGNQGGESIIICNGNEQKVHSYIIFEGLLRGQSVQENKTTTTEKVSLGDAGYESDHQRFQDTTLSLSMSSRPSSHSFLNRSHSTGPDANDVSLELTLS* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0034 283 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 74 127 IPR006447 GO:0003677
Gso9g0034 283 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 40 260 IPR044848 GO:0003700
Gso9g0034 283 SUPERFAMILY Homeodomain-like 72 128 IPR009057 -
Gso9g0034 283 MobiDBLite consensus disorder prediction 242 283 - -
Gso9g0034 283 Pfam Myb-like DNA-binding domain 76 126 IPR001005 -
Gso9g0034 283 MobiDBLite consensus disorder prediction 10 44 - -
Gso9g0034 283 Gene3D - 73 131 - -
Gso9g0034 283 MobiDBLite consensus disorder prediction 221 283 - -
Gso9g0034 283 MobiDBLite consensus disorder prediction 1 44 - -
Gso9g0034 283 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 130 IPR017930 -
Gso9g0034 283 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 40 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0034 Gso-Chr9 339968 343948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0034 65 131 G2-like Transcription Factor Family AT2G42660 77.612 2.62e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gso9g0034 Myb_DNA-binding 1.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0034 - - gmx:100798980 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0916 15 8547417 8551532 Gso9g0034 9 339968 343948 GST