Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0022 ATGTTGTTAGAGAGCACCAAGATGGCCTCTTCAACTTTTCTTCGTTCCTATTTTCTGCTTCTTCTTCTAATTATTCTCCCCTTTCTCCCATCTGTGTTTAGTGCTACTTCTTCAAACTGTAATGTAGACTTAAATTCCTCTCTGGTCACCAATGGCACATGGAATTCACCTTCTGGTCACTTTGCCTTTGGTTTCCAAAGTGTTTTATTCGACAACAAGGAGTTCATGTCCGTGCTTGCAGTTTGGTTTGCCAAAGACCCCAACAGAACCATAGTATGGTATGCAAAACAAAAACAAAGTCCTGCTTTTCCTTCCGGTTCCACAGTAAACCTAACAAACAAAGGAATTGTAGTCAACGATCCAAAGGGTCATGAGATGTGGCATCGTCCAGAAAATAACACTACTATTGCCTTAGTATCATGTGCTTCTATGTTAGACAATGGAAGTTTTGTGCTTCTTGATGAAAGTGGGAAGCAGGTTTGGGAGAGTTTTGAAGAGCCTACAGATACCATTTTGCCTGGTCAGAATCTGGCTAAGCCTAAAACCTTCAGAGCACGTGAATCTGACACAAGTTTTTATAATGGGGGTTTTGAACTCAGTTGGCAGAACGATAGCAACTTGGTTCTTTACTATTCACCACAATCAAGCGATGATCAAGCCTCTCAATCTCCTACAGGTGAAGCTTACTGGGCCACTGGAACTTTCAAAACTGAATCACAACTATTCTTTGATGAGTCCGGACGCATGTACATAAAAAATGACACGGGTACAGTGATCAGTGAAATCACATACAGTGGACCAGAAGAGTTCTTCTACATGGCTAGAATTGACCCTGATGGGGTTTTCAGATTATATCGGCATCCGAAAGGTGAGAACACAGTTGCTGATAGTTGCAGTTCGGGGTGGTGGAGTGTGGTGCAACAGTATCCCCAAGATATTTGTCTTTCCTTCACAAAACAAACTGGGAATGTAATCTGTGGTTATAACAGCTACTGCATTACCATCAATGGGAAGCCTGAGTGTGAGTGCCCGGATCATTATTCTTCTTTTGAACATGACAATCTCACAGGTTGTAGGCCAGATTTTCCCCTGCCGAGCTGCAACAAAGACGGGTGGGAGCAGAATAAGGATCTTGTAGATTTCAAAGAGTATACAAATTTGGACTGGCCTCTCTCTGATTATGACAAGTTGGTTGCAACTGCTATGGACAAGGATATGTGTAAACAAAAGTGCCTTGAGGATTGCTTTTGTGCTGTAGCCATATATGGTGAGGGACAATGTTGGAAGAAGAAGTATCCTTTCAGTAATGGAAGGAAGCACCCTAATGTTACTAGAATAGCTCTTGTCAAGGTACCTAAAAGAGATTTGGACAGGGGTGGGAGAGAACAGACTACACTTGTGCTTGTCATATCAATATTGCTTGGGAGCTCAGTGTTTCTCAATGTGCTTCTATTTGTTGCCTTGTTTGTTGCTTTTTTCATTTTCTACCACAAGAGGCTTTTGAATAATCCAAAATTGTCAGCTGCAACCATAAGATCTTTTACATACAAGGAGCTTGAAGAAGCAACCACGGGGTTCAAACAAATGTTGGGTCGTGGTGCTTTTGGAACAGTCTATAAAGGGGTGTTAACATCAGATACAAGCAGGTATGTTGCTGTGAAGAGGCTAGATAAGGTGGTGCAAGAAGGCGAGAAGGAGTTCAAAACAGAAGTGAGTGTGATTGGACAAACCCACCACAGGAACTTGGTTCGTTTACTTGGTTATTGTGACGAAGGGGAGCATCGTCTTCTGGTGTATGAGCACATGAGCAATGGCTCCTTGGCTAGCTTTCTCTTTGGGATATCAAGGCCCCATTGGAACCAAAGAGTGCAAATTGCTTTGGGGATTGCAAGAGGTCTCACATATTTGCATGAAGAGTGCAGCACTCAGATCATTCATTGTGACATAAAGCCTCAGAATATACTCTTAGACGAGTTGTTCACGCCAAGGATTGCTGATTTTGGGTTGGCAAAGTTGTTGTTGGCTGAACAATCAAAAGCTGCTAAGACGGGTTTGAGAGGGACAATTGGTTACTTTGCACCTGAGTGGTTTAGGAAAGCTTCAATCACCACTAAAATAGACGTATATAGTTTTGGGGTGGTGTTGTTAGAGATCATATGTTGCAAGTCAAGCGTTGCCTTTGCGATGGCTAATGATGAAGAGGCACTTATAGATTGGGCATATCGGTGTTATAGCCAAGGGAAGGTGGCTAAATTGGTAGAAAATGATGAGGAGGCAAAGAATGATATAAAGAGAGTGGAAAAGCATGTCATGGTAGCAATTTGGTGCATTCAAGAGGATCCTTCGTTGAGACCCTCCATGAAGAAGGTTACCCAAATGCTTGAGGGCGTGACAACAGTTTCTGTGCCACCTCGCCCTTCCATATTCAGTTCATCATCGTTTGAAATTTCATTTACTTCGTAA 2463 0.4247 MLLESTKMASSTFLRSYFLLLLLIILPFLPSVFSATSSNCNVDLNSSLVTNGTWNSPSGHFAFGFQSVLFDNKEFMSVLAVWFAKDPNRTIVWYAKQKQSPAFPSGSTVNLTNKGIVVNDPKGHEMWHRPENNTTIALVSCASMLDNGSFVLLDESGKQVWESFEEPTDTILPGQNLAKPKTFRARESDTSFYNGGFELSWQNDSNLVLYYSPQSSDDQASQSPTGEAYWATGTFKTESQLFFDESGRMYIKNDTGTVISEITYSGPEEFFYMARIDPDGVFRLYRHPKGENTVADSCSSGWWSVVQQYPQDICLSFTKQTGNVICGYNSYCITINGKPECECPDHYSSFEHDNLTGCRPDFPLPSCNKDGWEQNKDLVDFKEYTNLDWPLSDYDKLVATAMDKDMCKQKCLEDCFCAVAIYGEGQCWKKKYPFSNGRKHPNVTRIALVKVPKRDLDRGGREQTTLVLVISILLGSSVFLNVLLFVALFVAFFIFYHKRLLNNPKLSAATIRSFTYKELEEATTGFKQMLGRGAFGTVYKGVLTSDTSRYVAVKRLDKVVQEGEKEFKTEVSVIGQTHHRNLVRLLGYCDEGEHRLLVYEHMSNGSLASFLFGISRPHWNQRVQIALGIARGLTYLHEECSTQIIHCDIKPQNILLDELFTPRIADFGLAKLLLAEQSKAAKTGLRGTIGYFAPEWFRKASITTKIDVYSFGVVLLEIICCKSSVAFAMANDEEALIDWAYRCYSQGKVAKLVENDEEAKNDIKRVEKHVMVAIWCIQEDPSLRPSMKKVTQMLEGVTTVSVPPRPSIFSSSSFEISFTS* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0022 820 ProSiteProfiles Bulb-type lectin domain profile. 39 165 IPR001480 -
Gso9g0022 820 SMART serkin_6 524 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0022 820 Gene3D Transferase(Phosphotransferase) domain 1 602 802 - -
Gso9g0022 820 SUPERFAMILY Protein kinase-like (PK-like) 508 795 IPR011009 -
Gso9g0022 820 Gene3D - 166 291 IPR036426 -
Gso9g0022 820 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 9 816 - -
Gso9g0022 820 Coils Coil 749 769 - -
Gso9g0022 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Gso9g0022 820 PANTHER - 9 816 - -
Gso9g0022 820 Gene3D - 37 165 IPR036426 -
Gso9g0022 820 CDD STKc_IRAK 530 796 - -
Gso9g0022 820 Pfam Protein kinase domain 527 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0022 820 Pfam D-mannose binding lectin 90 183 IPR001480 -
Gso9g0022 820 PIRSF SRK 10 819 IPR024171 GO:0004674
Gso9g0022 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 188 288 IPR036426 -
Gso9g0022 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 234 IPR036426 -
Gso9g0022 820 CDD PAN_AP_plant 373 452 - -
Gso9g0022 820 Gene3D Phosphorylase Kinase; domain 1 496 601 - -
Gso9g0022 820 ProSiteProfiles Protein kinase domain profile. 524 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0022 820 SMART blect_4 45 167 IPR001480 -
Gso9g0022 820 ProSitePatterns Protein kinases ATP-binding region signature. 530 554 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0022 Gso-Chr9 239234 242377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0022 494 796 Receptor kinase-like Gene Family AT1G60800 43.408 1.46e-72 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso9g0022 Pkinase 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0022 - - gmx:100796323 1583.16