Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g0015 ATGTCGCTGAATATGAAAACCCTAACCCAAGCATTGGCGAAGACCGCGGCGGTGATCGAGAAGACAGTGCAGACGACGGTGCAGGAGGTGACGGGCCCGAAGGCACTTCAGGACTACGAGCTGCTCGACCAGATCGGCTCCGCGGGGCCCGGGCTCGCCTGGAGACTCTATTCGGGCCGGGCCCGTGATCCCTCGCGGCAGCACCAGTATCCGGTGGTGTGTGTATGGGTGTTGGACAAGCGCTCTCTTTCCGAGGCCCGAATGCGCGCGGGCCTCACCAAGGCCGCCGAGGATTCCTTTCTAGATTTGATTCGGACGGATGCCGCCAAGCTCGTCCGCCTCAGGCATCCCGGCGTCGTTCACGTCGTCCAGGCCCTCGACGAGAGCAAGAATGCAATGGCTATGGTCACCGAACCCTTGTTTGCTTCCGCTGCCAATACTCTTGGCATTGTCGACAATATTCCTAATCTTCCTAAAGATCTCAGGGGAATGGAAATGGGAATTTTGGAGGTGAAGCATGGTTTACTTCAAATAGCAGAATCCCTCGACTTTCTCCACAACCATGCTCATCTTCTTCATCGAGCTATATCACCTGAGAACATTCTGATCACCTTGAGTGGAGCTTGGAAACTCGCTGGATTTGGTTTTGCAGTTTCTGCTACTCAGACCTCTGGTGACTCATCTAATCTGCAACCCTTCCATTATGCTGAATATGATGTTGAGGACTCTATCTTGCCACTTCAACCATCACTTAATTACACTGCTCCTGAGCTGGCGAGGAGCACTGCGTCTTCAGCTGGGTGCTCATCTGATATTTTCAGTTTTGGATGTCTTGCCTACCATTTAATTGCCCGCAAGCCTTTGTTTGACTGCCACAACAATGTGAAGATGTACATGAATACCTTGACTTACTTATCCAGTGGCGCATTCTCATCTATCCCATCAGAACTGGTTCCTGACTTGCAAAGGATGCTTTCTCCAAATGAGTCTTCCAGGCCATCAGCAATGGATTTTACAGGCTCACCATTTTTTAGGCATGACACTAGGTTGCGTGCTCTACGCTTCCTTGATCACATGCTTGAAAGAGATAACATGCAGAAGTCAGAGTTCTTAAAAGCATTGTCAGATATGTGGAAAGATTTTGATTCACGTGTATTGCGATACAAGGTCCTTCCACCACTTTGTGCAGAGCTTAGGAATGTGGTGATACAGCCAATGATTCTACCAATGGTTCTAACCATTGCCGAGTCTCAGGACAAGAATGATTTTGAGCAATCAACACTTCCAGCACTTGTCCCTGTCTTTAGTTCTGCTGCTGGTGAGACACTATTACTGCTTGTGAAGCATGCTGAGTTTATAATAAACAAGACTAGTCAAGAACATTTAGTTTCACATGTTCTTCCAATGATTGTTCGGGCCTATGATGATACTGATGCTCGTTTGCAAGAAGAGGTCCTGAAAAAATCTGTATCCCTTGCCAAACAACTAGATGCCCAGCTCGTGAAACAAGTGGTTTTGCCCCGTGTTCATGGATTAGCACTTAAAACAACAGTTGCGGCGGTTAGAGTCAATGCATTGTTGTGCCTTGGGGACATGGTTAGCCGACTTGATAAACATGCTGTCTTGGACATCTTGCAAACTATTCAACGCTGTACTGCTGTTGATCGCTCCCCTCCAACCCTTATGTGTACCCTAGGGGTTGCAAATTCTATTTTCAAGCAGTATGGAGTAGAATTTGTAGCTGAGCATCTTCTTCCATTGCTTATGCCCCTGCTGACTGCTCCACAATTGAATGTTCAACAGTTTGCCAAATATATGCTCTTTGTCAAGGATATGCTCCACAAAATAGAAGAGAAACGAGGAGTGGCTGTGACTGATTCTGGAACGCCAGAGATAAAACTTGCTCCCATGGTTAATGGCCATCAATCCGAAGCCATGCGGACAAGCAGCAGCTCTATACCTGCTTCAACTAAAAGCAGCTCTTGGGATGATGAAGATTGGGGTCCCAAACCAAAGGGCACTGCCTCTTCTATCCAGAATTCTATTGATGTAACCAGTCAATCTATGGCAGGCAACCCTGTGGGTCAAGTAACATCTTTACAAAAGCATTTGTCCTTAGCGGCTTTATCTGCTAAGCAAACAACCAAGCCATGTCCCTCAGTGGATGTAGAATGGCCACCTCGTGCATCTTCTGGTGTTACCCTACAATTTGGTGATACTGAAACGCAGACAATAGCAGCAGGAACTTCATCCCCATCTAATCTTGAATCTGATGATCCTTTTGCTGATTGGCCTCCACGTCCTAATGGCTCAGTATCAGGTGGATCTGGAATATCCAACAATGGTACTTTAGGAATGCCACTGAACAAAGTTGGGTTTAATTCAATGAGAAGCACTTCAAGCAATATGGGTCCCCAAACTAGCAACAGTTGGCCTGTTAATTCCCAAAGTTCTGCAGAGTCCATTAGTTTGAACTCAAGGAATCCTATTTCAACAATGGGTAGCCTGAATAGTGGTGGCCTTGGACAACAGAAATCTCTTGGGTTTGTAAAACAAGGCCAAGCTTTCCCAGCATCAATTGTTTCATATAATAATGTTCAGTCAACAGCAACAGATCTTGGATCAATATTTTCTTCCAACAGGAATGAACAAATTGCACCTAAACTTGCACCACCCCCTTCAACCACTGTGGGTAGAGGACGGGGAAGAGGGAGGGGAGCTGCTTCAACCACTGGTTCCTCTCATACCAAGTCACACGCTGAGCAGCCACCCCTTTTGGATTTGTTGGGGTAG 2793 0.469 MSLNMKTLTQALAKTAAVIEKTVQTTVQEVTGPKALQDYELLDQIGSAGPGLAWRLYSGRARDPSRQHQYPVVCVWVLDKRSLSEARMRAGLTKAAEDSFLDLIRTDAAKLVRLRHPGVVHVVQALDESKNAMAMVTEPLFASAANTLGIVDNIPNLPKDLRGMEMGILEVKHGLLQIAESLDFLHNHAHLLHRAISPENILITLSGAWKLAGFGFAVSATQTSGDSSNLQPFHYAEYDVEDSILPLQPSLNYTAPELARSTASSAGCSSDIFSFGCLAYHLIARKPLFDCHNNVKMYMNTLTYLSSGAFSSIPSELVPDLQRMLSPNESSRPSAMDFTGSPFFRHDTRLRALRFLDHMLERDNMQKSEFLKALSDMWKDFDSRVLRYKVLPPLCAELRNVVIQPMILPMVLTIAESQDKNDFEQSTLPALVPVFSSAAGETLLLLVKHAEFIINKTSQEHLVSHVLPMIVRAYDDTDARLQEEVLKKSVSLAKQLDAQLVKQVVLPRVHGLALKTTVAAVRVNALLCLGDMVSRLDKHAVLDILQTIQRCTAVDRSPPTLMCTLGVANSIFKQYGVEFVAEHLLPLLMPLLTAPQLNVQQFAKYMLFVKDMLHKIEEKRGVAVTDSGTPEIKLAPMVNGHQSEAMRTSSSSIPASTKSSSWDDEDWGPKPKGTASSIQNSIDVTSQSMAGNPVGQVTSLQKHLSLAALSAKQTTKPCPSVDVEWPPRASSGVTLQFGDTETQTIAAGTSSPSNLESDDPFADWPPRPNGSVSGGSGISNNGTLGMPLNKVGFNSMRSTSSNMGPQTSNSWPVNSQSSAESISLNSRNPISTMGSLNSGGLGQQKSLGFVKQGQAFPASIVSYNNVQSTATDLGSIFSSNRNEQIAPKLAPPPSTTVGRGRGRGRGAASTTGSSHTKSHAEQPPLLDLLG* 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g0015 930 MobiDBLite consensus disorder prediction 642 662 - -
Gso9g0015 930 MobiDBLite consensus disorder prediction 745 823 - -
Gso9g0015 930 SUPERFAMILY Protein kinase-like (PK-like) 34 347 IPR011009 -
Gso9g0015 930 Gene3D - 348 621 IPR011989 -
Gso9g0015 930 SMART serkin_6 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0015 930 SUPERFAMILY ARM repeat 346 608 IPR016024 -
Gso9g0015 930 MobiDBLite consensus disorder prediction 772 823 - -
Gso9g0015 930 Pfam Protein kinase domain 104 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g0015 930 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 7 929 - -
Gso9g0015 930 Gene3D Transferase(Phosphotransferase) domain 1 161 347 - -
Gso9g0015 930 MobiDBLite consensus disorder prediction 882 930 - -
Gso9g0015 930 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 929 - -
Gso9g0015 930 MobiDBLite consensus disorder prediction 637 677 - -
Gso9g0015 930 CDD PK_SCY1_like 45 346 - -
Gso9g0015 930 Gene3D Phosphorylase Kinase; domain 1 35 138 - -
Gso9g0015 930 ProSiteProfiles Protein kinase domain profile. 39 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g0015 Gso-Chr9 177310 187802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g0015 104 349 CBL-interacting serine-threonine protein kinases AT2G26980 23.200 2.49e-11 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL2 Gso9g0015 Pkinase 1.8e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g0015 K17541 - gmx:100788400 1765.36