Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso9g0009 | ATGTCTGAGTGTGGCTGTTCCGAGTCAGACCCTTCGTGTGGTTGTTGGTCGAGCAGCAGCAGCAGATCTGTGGCCTCAACTGAACTGAAGCTGTACCGAGCATTCATCTTCTGTGTTCCCATCTTCTTCACTCTCATTCTCCTCTTTCTCTTCTATCTCTTCTACCTCCGACCGCGAACTAGGCTCCATTGGATTTCACACTTTCGCCTTCCCAGCAACAACAACCGCAATAATGCCATCTCCACATTGGGTTTGGGCTTGAACAAAGAACTTAGAGAGATGCTGCCCATTATTGTCTACAAGGAAAGCTTCTCCGTCAAAGATACTCAATGCTCAGTGTGCCTTTTGGACTACCAGGCAGAGGATAGGCTGCAACAAATACCTGCATGTGGCCATACATTTCATATGAGCTGCATTGATCTTTGGCTTGCCACCCATACCACCTGTCCTCTCTGCCGCTTCTCCCTACTAACCACTGCTAAATCTTCAACGCAGGCATCCGATATGCAGAACAATGAAGAAACACAAGCCATGGAATTCTCTGAATCAACATCTCCTAGGGATCTAGAAACCAATGTCTTCCAAAATGTCTCTGGAGAAGTTGCCATCAGCACTCACTGCATTGATGTTGAAGGGCAAAATGTGCAAAACAATCAATAG | 660 | 0.4667 | MSECGCSESDPSCGCWSSSSSRSVASTELKLYRAFIFCVPIFFTLILLFLFYLFYLRPRTRLHWISHFRLPSNNNRNNAISTLGLGLNKELREMLPIIVYKESFSVKDTQCSVCLLDYQAEDRLQQIPACGHTFHMSCIDLWLATHTTCPLCRFSLLTTAKSSTQASDMQNNEETQAMEFSESTSPRDLETNVFQNVSGEVAISTHCIDVEGQNVQNNQ* | 220 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso9g0009 | 219 | ProSiteProfiles | Zinc finger RING-type profile. | 111 | 153 | IPR001841 | - | |
Gso9g0009 | 219 | Pfam | Ring finger domain | 110 | 153 | IPR001841 | - | |
Gso9g0009 | 219 | SUPERFAMILY | RING/U-box | 95 | 158 | - | - | |
Gso9g0009 | 219 | PANTHER | RING-H2 FINGER PROTEIN ATL7-LIKE | 17 | 176 | - | - | |
Gso9g0009 | 219 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 91 | 159 | IPR013083 | - | |
Gso9g0009 | 219 | SMART | ring_2 | 111 | 152 | IPR001841 | - | |
Gso9g0009 | 219 | CDD | RING-H2_EL5_like | 110 | 153 | - | - | |
Gso9g0009 | 219 | MobiDBLite | consensus disorder prediction | 165 | 186 | - | - | |
Gso9g0009 | 219 | PANTHER | RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING | 17 | 176 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso9g0009 | Gso-Chr9 | 100085 | 103940 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso9g0009 | 21 | 157 | C3H Transcription Factor Family | AT4G10150 | 61.111 | 3.29e-58 | 182 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso9g0009 | K19039 | - | gmx:100794211 | 396.356 |