Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g3032 ATGGCTGAAGTTGAATACCATGCAAAATCCAATACTAACACTCCACCCCTAAAGCTCTTCGGCATCAACATTAACAAGTCCCCAGAAGATCAAACTCACGAATTAGCAAGTTCGAATTCCGAGACTTTCATGAATTCAAGAAAGTACGAGTGCCAGTACTGCTGCAGAGAATTCGCAAACTCACAGGCACTGGGAGGGCACCAAAACGCGCACAAGAAAGAGAGACAGCTCTTGAAACGTGCCCAAATGCAAGCTGCTCGTGGTTTTGTCGCTTCACAAATTCATAACACAATCATATCAAGTTTCTCTCCACAGTCTCAGCCACCTTTGTCGTGGTTATGCACACCACATGGTGGTGCTGCCTTTGTGGCTCCTGGAAGACTAGTCTATGCTGCAGCTGCTGATGGCCGTGCCCGCCACCACCATCCTCTACCACGGTTCGGTGGCTTCAACGGCGGTGATGGTAGTGGTGGTGGTCGTGAACGAGTCTTCGATTTGGATTTGCATCTTAGCCTATGA 519 0.4875 MAEVEYHAKSNTNTPPLKLFGININKSPEDQTHELASSNSETFMNSRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMQAARGFVASQIHNTIISSFSPQSQPPLSWLCTPHGGAAFVAPGRLVYAAAADGRARHHHPLPRFGGFNGGDGSGGGRERVFDLDLHLSL* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g3032 172 PANTHER ZINC FINGER PROTEIN 5 4 113 IPR044299 GO:0010090
Gso8g3032 172 ProSitePatterns Zinc finger C2H2 type domain signature. 51 71 IPR013087 -
Gso8g3032 172 Gene3D Classic Zinc Finger 26 101 - -
Gso8g3032 172 PANTHER ZINC FINGER PROTEIN 6-LIKE 4 113 - -
Gso8g3032 172 ProSiteProfiles Zinc finger C2H2 type domain profile. 49 76 IPR013087 -
Gso8g3032 172 SUPERFAMILY beta-beta-alpha zinc fingers 45 76 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g3032 Gso-Chr8 48006712 48007646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g3032 12 109 C2H2 Transcription Factor Family AT1G67030 56.364 3.08e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g3032 - - gmx:100500337 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2434 18 57006341 57007330 Gso8g3032 8 48006712 48007646 GST