Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g3020 ATGCGGATGAGTTGCAATGGATGTCGAGTTCTGAGAAAAGGTTGCAGTGAAAATTGCAGCATCAGACCCTGTTTACAATGGATCAAAAGCCCAGAATCCCAAGCCAATGCTACTGTGTTTCTCGCTAAGTTTTATGGTCGTGCTGGTCTCATGAACCTCGTTAACGCAGGCCCCGAACATCTTCGTCCAGCGATCTTTCGCTCGTTGTTGTACGAGGCATGCGGTCGGATAGTGAACCCGATTTACGGGTCTGTCGGGCTATTATGGTCCGGGAGCTGGCAGCTGTGTCAAGCCGCCGTGGAAAACGTCTTGAAAGGCGCGCCGATTACGCCGATCACGTCTGAAGCCGCGGCTAGCGGGCGGTGCCCACCGCTCAAGGCTTACGACATACGCCACGTGTTCAAAGACGAGAACTCCGCCGCCGCGTCCAACGAAACTCAGCACCAACGAGTCAAGACCCGCTCTCGAGTGAAGCGACCCCTCGCCAAGCCCAAATCCACCGCCAACCAAAACAACAACATTAACACTAAGAATACGGGAACCGAATTCGGATCGGATGAACCGGGTTTGGTGGCATGCGATTGGACCGAGGAGGCGTTGAACCGGTCTGGAAGTCACGATTCGACGCTGAGCCACCAGTCGGAGGCGGCGAATGCGGTGGAAAGTGAGAGCATTTTGTCTGCTGAGACTTCGATCCTCTTCCGAGATGAACCGGAATCCAACCCGAAGCGCTTGGACCGGACCGATGATGTTGGTTTAGAGCTTACGCTAGGGTTCGAGCCGGTATCAGGTGCGCAGCACGTGGTTCCGGTGAAGAAGAGAAGGATTGATTTGAAGGATTTTAGTGGCTCGTCGTGCAAGATGGAGCTGGGGCTTGAATGCTCGGCTTGA 891 0.5455 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVENVLKGAPITPITSEAAASGRCPPLKAYDIRHVFKDENSAAASNETQHQRVKTRSRVKRPLAKPKSTANQNNNINTKNTGTEFGSDEPGLVACDWTEEALNRSGSHDSTLSHQSEAANAVESESILSAETSILFRDEPESNPKRLDRTDDVGLELTLGFEPVSGAQHVVPVKKRRIDLKDFSGSSCKMELGLECSA* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g3020 296 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 293 - -
Gso8g3020 296 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Gso8g3020 296 PIRSF AS2 1 296 IPR017414 -
Gso8g3020 296 MobiDBLite consensus disorder prediction 202 222 - -
Gso8g3020 296 MobiDBLite consensus disorder prediction 139 188 - -
Gso8g3020 296 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Gso8g3020 296 MobiDBLite consensus disorder prediction 164 183 - -
Gso8g3020 296 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g3020 Gso-Chr8 47881321 47882809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g3020 1 292 AS2 family AT3G02550 55.298 1.50e-104 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso8g3020 LOB 2.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g3020 - - gmx:100812981 593.964