Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g3018 ATGGCACCTTTATCTTGTTCTACACCTTTACTCACCGGAAAAAAGAAGGTTCTTTTCATAATGGGTGCAACTGAGAGAGGCAAAACCAAGTTATCCATTAACTTAGACACTCAATTTCCTTCTGAAATCATTAACTCTGACAAAATTCAAGTCTATAAGGGCCTTGACATTATCACCAACAAGGTACCAGAGTCAGAATGTCGTGGTATTTCCCATCATCTGATAGGCATTATTAACAATCCTGACTATGATTTCACTGTTGATGACTTTTGCAAACATGTCCTCAATGCTCTCGATCTCATCTTTGAAAATGGACACCTACCTATTATCGTGGGAGGCTCAAACACTTATCTTGCAACATTGCTTGAGGATCTCAACATGGCTTTTCATTCCAAATATGATTATTGCTTCATTTGGGTTGATGTATCTTTAACCGTGTTGTTTCAGTATTTAGATAAAAGAGTGGACAAAATGGTTGATGCGAGAGTTGTGGATGAGATTCAAGAAAACTTTGTGCCTGGAGCAAATTACTCTCGTGGGGTTAGAAGAGCCATCAGGGTTCCTGAGCTAGGAGAGTATTTCCTGGTTGAGAAGGAAATTAGTGATAAGGCTGAAAAAGAGAAGATGCTACAACATGCTATTGCTAGAACCAAAGAGAACACTTGTAAATTGGTTGAGATGCAACTCTTAAAGATCCATAAGATTAACTATGAGCTTGGATGGGGAATGACCAAAATTGATTCCACAGAAGTGTTTGAGGCTATCTTAAAAGGAGTTGACTATAAGAACTTGTATCATGAAATTATATTCAAACCAAGCATGGAGATAGTGAAAAGATTCCTGCAGGAGACAACTCGAATGTGGGGAAAGACACCATGCCAATATGACCAACAAGTGACAATTTATACTTAG 912 0.3827 MAPLSCSTPLLTGKKKVLFIMGATERGKTKLSINLDTQFPSEIINSDKIQVYKGLDIITNKVPESECRGISHHLIGIINNPDYDFTVDDFCKHVLNALDLIFENGHLPIIVGGSNTYLATLLEDLNMAFHSKYDYCFIWVDVSLTVLFQYLDKRVDKMVDARVVDEIQENFVPGANYSRGVRRAIRVPELGEYFLVEKEISDKAEKEKMLQHAIARTKENTCKLVEMQLLKIHKINYELGWGMTKIDSTEVFEAILKGVDYKNLYHEIIFKPSMEIVKRFLQETTRMWGKTPCQYDQQVTIYT* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g3018 303 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 7 294 - -
Gso8g3018 303 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 135 IPR027417 -
Gso8g3018 303 Pfam IPP transferase 50 125 - -
Gso8g3018 303 Pfam IPP transferase 131 229 - -
Gso8g3018 303 Gene3D - 14 281 IPR027417 -
Gso8g3018 303 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 144 243 - -
Gso8g3018 303 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 7 294 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g3018 Gso-Chr8 47841236 47842147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g3018 98 292 C2H2 Transcription Factor Family AT2G27760 31.222 1.48e-19 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g3018 K10760 - gmx:121173984 513.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2449 18 57180906 57182107 Gso8g3018 8 47841236 47842147 GST