Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g3012 ATGGCTGCCATTTCACTCAGGCACAACCCTCAAGCAAACAACACTAACCAGCAACGTGAAATCATCACTGAAGAAATCCAAGGACTCATAAGAGTCCACAGAGATGGACGTGTAGAAAGGCCATCGATTGTGCCTAGTGTCTCCAGCACAGTGGCATCAGAACGTGGTGTCACTGCCAAAGATGTTATGATCAACAAAGAGACCAATTTGTGGGCACGTGTTTATGTGCCAATAAGTGCTTGTCACTACTCAAAGCTTCTTCCTTTGCTTGTTTACTTCCACGGTGGTGGATTCTGTGTTGGTTCTGCAGCTTGGAGCTGTTACCATGAGTTCTTGACCAACCTTGCTTCCAAAGCAAACTGTGTCATTCTCTCTGTGGATTACCACTTAGCCCCTGAGAACCGTCTTCCAATGGCATATGATGATGGTTGTAATGCTCTCATGTGGGTGAAAAGAGAAGCTTTAAATGGCTCTTGTGTGCAAAAGTGGTGGCTGAGTCATTGCAACATGTCTTCCCTTTTCCTAGCTGGTGATAGTGCAGGTGCCAACATAGCCTACAATGTGGCCACACGCATGCATATGGGATCAACATCAAACACACCATTATTATCTCTCAAGGGTGTTATATTGATCCAACCTTTCTTTGGAGGAGAAGAAAGAACTTTCTCTGAGAAACATTCCCTTCAGCCACCCAATTCAGCACTCACTTTATCCGTTTCTGACACTTATTGGCGCTTGGCACTTCCTCTTGGGGCTACACGTGACCACTCTTATTGCAACCTTCTTGCAGATGGCTCGGTCAAGTTGAGAGATTTGAGGCTTCCATCCACTATGGTGTGTGTCGCAGAAATGGATATACTGAGAGATAGGAACTTGGAGTTCTCAAACGCTTTGGCCAAAGCAGGGAAAAGGGTTGAGACGGTTGTTTACAAAGGAGTTGGCCATGCGTTCCATGTGCTGCATAATTACCAGCTTTCCCATTCCCGAACCCAAGACATGATATCTCATATCAGGAACTTTCTTAACCAGTAA 1032 0.4545 MAAISLRHNPQANNTNQQREIITEEIQGLIRVHRDGRVERPSIVPSVSSTVASERGVTAKDVMINKETNLWARVYVPISACHYSKLLPLLVYFHGGGFCVGSAAWSCYHEFLTNLASKANCVILSVDYHLAPENRLPMAYDDGCNALMWVKREALNGSCVQKWWLSHCNMSSLFLAGDSAGANIAYNVATRMHMGSTSNTPLLSLKGVILIQPFFGGEERTFSEKHSLQPPNSALTLSVSDTYWRLALPLGATRDHSYCNLLADGSVKLRDLRLPSTMVCVAEMDILRDRNLEFSNALAKAGKRVETVVYKGVGHAFHVLHNYQLSHSRTQDMISHIRNFLNQ* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g3012 343 Gene3D alpha/beta hydrolase 6 342 IPR029058 -
Gso8g3012 343 PANTHER ARYLACETAMIDE DEACETYLASE 11 341 - -
Gso8g3012 343 Pfam alpha/beta hydrolase fold 90 318 IPR013094 GO:0016787
Gso8g3012 343 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 173 185 IPR033140 -
Gso8g3012 343 PANTHER CARBOXYLESTERASE 6-RELATED 11 341 - -
Gso8g3012 343 SUPERFAMILY alpha/beta-Hydrolases 57 343 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g3012 Gso-Chr8 47817235 47818720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g3012 1 342 Carbohydrate Esterase AT5G16080 54.000 1.79e-125 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g3012 - - gmx:100804774 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2456 18 57259720 57261036 Gso8g3012 8 47817235 47818720 GST