Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g3004 ATGCCTATATCAATGGACCCCCTTGTTCTTGGACGTATAATAGGAGATATTTTGGATCCCTTCACGAGTTCTGTTTCTCTGAGGGTTGTTTATAACAACCAGTCATCGGTTATCAATAGTTGTGAGTTCAAACCTTCCCAAATCGTCAACAAACCAAGAATTAATATTCGTGGAAATGACCTAGGGATCTTTTACACTCTGATAATGGTGAACCCCGATGCTCCTAGCCCAAGTGACCCACATATGAAGGAATATTTGCATTGGTTGGTAACCAATATTCCAGCATCTACAGGGGCAACCACTGGAGAAGAGATTGTGGAGTATGAAAGTCCACGACCAACTTCTGGGATTCATCGGATTGCTTTTGTGTTGTTTCGTCAATTTGATAGACAAATTGTGCATGCTCCAAGATGGCGCCAAAATTTCAACACTAGAGATTTTGCTGAGGTTTACAACCTTGGATCACCAGTTGCTGCTGTGTATTTCAACTGTCAACGTGAAGGTGGTTGGGGTGGACGAAGGAGATGA 528 0.4261 MPISMDPLVLGRIIGDILDPFTSSVSLRVVYNNQSSVINSCEFKPSQIVNKPRINIRGNDLGIFYTLIMVNPDAPSPSDPHMKEYLHWLVTNIPASTGATTGEEIVEYESPRPTSGIHRIAFVLFRQFDRQIVHAPRWRQNFNTRDFAEVYNLGSPVAAVYFNCQREGGWGGRRR* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g3004 175 PANTHER FLOWERING LOCUS PROTEIN T 4 174 - -
Gso8g3004 175 Pfam Phosphatidylethanolamine-binding protein 62 161 IPR008914 -
Gso8g3004 175 SUPERFAMILY PEBP-like 12 167 IPR036610 -
Gso8g3004 175 CDD PEBP_euk 25 164 IPR035810 -
Gso8g3004 175 Gene3D - 2 169 IPR036610 -
Gso8g3004 175 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 4 174 IPR035810 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g3004 Gso-Chr8 47727743 47729489 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g3004 K16223 - gmx:100803719 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2466 18 57376789 57379367 Gso8g3004 8 47727743 47729489 GST
Gso8g3004 8 47727743 47729489 Gso5g0022 5 185047 189079 PCT
Gso8g3004 8 47727743 47729489 Gso19g0496 19 10181179 10184500 PCT