Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2987 ATGTTCACATACACAACACACCTACCTAATACCTTGTTTATGAGAGCTATAAGTCACCACCTTTCACTGCTCAATTGGAGAATCTCTACCTCAGGATCTCTTTTTTCTCTGAGAAATACTTGTACCAATACCATGTCTCAATCTGATAATTCCTCTCCTTTTACCACACCCAGATTGGTTCTGAAGAAGGTTTTGGCCAAATCTCAACATGAAGGGGATGGAGCTGTTGTCAGAAGAGGCATTGGAAGGAGCGAGTTGAAGAACTTGGATCCCTTCCTAATGTTGGATCACTTCTCAGTATCTCCCCCAGCAGGATTTCCCGATCATCCACACCGAGGTTTTGAAACCGTCACCTACATGCTAGAGGGAGGCATCACTCACCAAGATTTTGCTGGGCACAAGGGTACAATAAGAGCTGGTGATGTTCAGTGGATGACCGCAGGAAGGGGAATAATTCACTCTGAAATGCCAGCAGAAGCAAACAACAACAAGGGATTGCAACTGTGGATCAATTTATCATCCAGGGACAAAATGATCGAGCCTAATTACCAAGAACTTCCAAGTGAGAACATAGCAACAGCAGAAAAAGATGGGGTTGAAGTGAGAGTGATAGCAGGGGAAGCAATGGGAGTGCATTCGCCTGTGTACACACGAACACCAACCATGTACCTTGTTTTCTCCATGATGCCCGAAACTCAGTGGAATCAGAGCATTCCAGAGTCGTGGAATGCCTTTGTTTATATAATTGAAGGTGAAGGAGTTTTCGGGTCTCCAACATCATCCCCAACTGTGCCACACCATGTCCTTGTTTTGACTCAAGGTGATGGCCTCAGCGTATGGAATAACTCTTCAAAGCCTTTGAGATTTGTTCTGATTGGAGGCCAACCACTTAATGAGCCAGTTGTTCAGCATGGCCCTTTTGTGATGAACACGCAGTCTGAGATTGAGAACACAATTGAAGACTATCACTATGGCAGGAATGGCTTTGAGATGAGCAAGTATTGGATGTCTCAATAG 1017 0.4464 MFTYTTHLPNTLFMRAISHHLSLLNWRISTSGSLFSLRNTCTNTMSQSDNSSPFTTPRLVLKKVLAKSQHEGDGAVVRRGIGRSELKNLDPFLMLDHFSVSPPAGFPDHPHRGFETVTYMLEGGITHQDFAGHKGTIRAGDVQWMTAGRGIIHSEMPAEANNNKGLQLWINLSSRDKMIEPNYQELPSENIATAEKDGVEVRVIAGEAMGVHSPVYTRTPTMYLVFSMMPETQWNQSIPESWNAFVYIIEGEGVFGSPTSSPTVPHHVLVLTQGDGLSVWNNSSKPLRFVLIGGQPLNEPVVQHGPFVMNTQSEIENTIEDYHYGRNGFEMSKYWMSQ* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2987 338 Pfam Pirin 78 170 IPR003829 -
Gso8g2987 338 Gene3D Jelly Rolls 71 323 IPR014710 -
Gso8g2987 338 CDD cupin_pirin_N 75 172 - -
Gso8g2987 338 PIRSF Pirin 56 336 IPR012093 -
Gso8g2987 338 SUPERFAMILY RmlC-like cupins 58 335 IPR011051 -
Gso8g2987 338 PANTHER PIRIN-LIKE PROTEIN 50 338 - -
Gso8g2987 338 CDD cupin_pirin_C 220 296 - -
Gso8g2987 338 Gene3D Jelly Rolls 192 297 IPR014710 -
Gso8g2987 338 Pfam Pirin C-terminal cupin domain 223 328 IPR008778 -
Gso8g2987 338 PANTHER PIRIN-RELATED 50 338 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2987 Gso-Chr8 47544145 47545984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2987 55 333 Calmodulin-binding Proteins AT3G59220 64.413 2.06e-129 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2987 K06911 - gmx:100802145 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2480 18 57537839 57539670 Gso8g2987 8 47544145 47545984 GST