Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2983 ATGGATGATGTTGATGAGAGTACTAAGAAGGGAAAAGGGAATAAGAAAGGTGGTGGTGGGCTGATCACGAAAACATGGGAGCGATGCAAGTCCATAGGACGAGGCCGAAAGGTAACTTCTTCTTCAACTAATACTAATACTAATACTATGAGAAGCAAATCATGGCCAAGGCGTGACCGAGAAAACAAAAACAAAAACAGTACTACTATTGTGGCCCCCGAAGGTTGCTTCTCGGTGTATGTTGGACCCCAAATGCAAAGGTTTGTAATCAAAACCGAGTACGCAAGCCACCCCTTGTTCAAGATGTTGCTCGAAGAAGCTGAATCTGAGTATGGTTACAACAGCCAAGGCCCTTTGGCCCTTCCCTGCCACGTTGATGTCTTCTACATGGTCTTGATGGAAATGGGTTCTGATGAAACTCAAACCACTCCTCAGGGCTGTGCCTGCGTTAAGCGATCTCCCTCTGCTTATCAACCTATGAAGTACCGACACTCTCCCTCTGCTTATCAACCTATGAAGTATCGACACTAA 531 0.4576 MDDVDESTKKGKGNKKGGGGLITKTWERCKSIGRGRKVTSSSTNTNTNTMRSKSWPRRDRENKNKNSTTIVAPEGCFSVYVGPQMQRFVIKTEYASHPLFKMLLEEAESEYGYNSQGPLALPCHVDVFYMVLMEMGSDETQTTPQGCACVKRSPSAYQPMKYRHSPSAYQPMKYRH* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2983 176 Pfam Auxin responsive protein 47 132 IPR003676 GO:0009733
Gso8g2983 176 PANTHER SMALL AUXIN-UP RNA-RELATED 21 155 - -
Gso8g2983 176 MobiDBLite consensus disorder prediction 1 68 - -
Gso8g2983 176 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 21 155 IPR003676 GO:0009733
Gso8g2983 176 MobiDBLite consensus disorder prediction 35 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2983 Gso-Chr8 47522469 47523669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2983 22 132 Calmodulin-binding Proteins AT5G20810 35.833 1.50e-19 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2983 K14488 - gmx:100799988 343.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2484 18 57564300 57565572 Gso8g2983 8 47522469 47523669 GST