Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2982 ATGAGTTGTTTTTGTGAGTTTCATTGTAAAGCTACTTTTCTCTGTTTGGGGATAAATAAAATGGGTTGCTTTTCATGTTTCGATTCGAGTTCCAAGGAGGATCACAATCTCCGTCCTCAGCACCAACCCAATCAACCTCTCCCTTCTCAGATTTCCAGATTGCCCTCTGGAGCAGACAAGTTACGGTCCAGAAGTAATGGAGGTTCCAAAAGAGAACTGCAACAGCCTCCTCCCACCGTCCAAATTGCTGCTCAAACATTTACTTTCCGTGAACTTGCCGCTGCAACTAAAAACTTTAGACCAGAGTCCTTTGTTGGGGAAGGTGGTTTTGGAAGGGTCTACAAAGGCAGGCTTGAAACCACTGCTCAGATTGTTGCTGTCAAACAGTTAGACAAAAATGGTCTTCAGGGTAATCGGGAATTCCTTGTAGAGGTTCTCATGCTCAGTCTTCTACATCACCCTAACCTTGTCAATCTCATTGGATACTGTGCGGATGGGGATCAACGCCTCCTCGTTTATGAATTTATGCCTTTGGGATCATTGGAAGATCACCTTCATGATCTTCCCCCTGATAAGGAACCACTAGATTGGAACACTAGAATGAAAATTGCTGTTGGTGCTGCAAAAGGATTAGAATACCTTCACGATAAGGCAAATCCTCCTGTCATCTACAGAGACTTCAAGTCATCTAACATATTACTTGATGAAGGATACCACCCAAAACTTTCTGACTTTGGTCTTGCGAAGCTTGGTCCTGTTGGTGACAAATCACATGTTTCTACCCGTGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCTATGACTGGACAGCTGACTGTGAAGTCTGATGTATATAGTTTTGGGGTGGTCTTCTTAGAGCTGATTACTGGCCGTAAAGCAATTGACAGCACCCAGCCGCAGGGAGAACAGAACCTTGTCACATGGGCACGTCCACTTTTTAATGACCGCAGGAAGTTTTCAAAGTTGGCTGATCCCAGGCTGCAGGGGCGATTTCCCATGCGGGGTCTTTACCAGGCTCTTGCTGTGGCATCAATGTGCATTCAAGAATCAGCTGCAACGCGTCCTCTAATTGGAGATGTGGTGACAGCCCTCTCTTATCTGGCCAACCAGGCATATGACCCCAATGGTTATAGGGGGTCTAGTGATGATAAAAGGAACAGAGATGATAAAGGTGGAAGAATATCCAAAAATGATGAAGCTGGGGGATCTGGACGCAGATGGGACTTGGAAGGATCCGAGAAAGATGACTCCCCACGAGAAACTGCAAGGATTTTAAACAGAGATCTAGATAGAGAACGAGCTGTGGCTGAAGCCAAGATGTGGGGAGAGAACTTGAGACAAAAAAGAAAACAAAGTTTGCAGCAGGGCAGTCTTGATGCTTAA 1410 0.4539 MSCFCEFHCKATFLCLGINKMGCFSCFDSSSKEDHNLRPQHQPNQPLPSQISRLPSGADKLRSRSNGGSKRELQQPPPTVQIAAQTFTFRELAAATKNFRPESFVGEGGFGRVYKGRLETTAQIVAVKQLDKNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAVGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTQPQGEQNLVTWARPLFNDRRKFSKLADPRLQGRFPMRGLYQALAVASMCIQESAATRPLIGDVVTALSYLANQAYDPNGYRGSSDDKRNRDDKGGRISKNDEAGGSGRRWDLEGSEKDDSPRETARILNRDLDRERAVAEAKMWGENLRQKRKQSLQQGSLDA* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2982 469 Pfam Protein kinase domain 102 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2982 469 MobiDBLite consensus disorder prediction 34 77 - -
Gso8g2982 469 MobiDBLite consensus disorder prediction 387 455 - -
Gso8g2982 469 ProSiteProfiles Protein kinase domain profile. 99 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2982 469 PANTHER OS07G0668900 PROTEIN 21 463 - -
Gso8g2982 469 ProSitePatterns Protein kinases ATP-binding region signature. 105 128 IPR017441 GO:0005524
Gso8g2982 469 Gene3D Phosphorylase Kinase; domain 1 83 175 - -
Gso8g2982 469 MobiDBLite consensus disorder prediction 384 469 - -
Gso8g2982 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Gso8g2982 469 CDD STKc_IRAK 105 373 - -
Gso8g2982 469 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 21 463 - -
Gso8g2982 469 SUPERFAMILY Protein kinase-like (PK-like) 84 371 IPR011009 -
Gso8g2982 469 Gene3D Transferase(Phosphotransferase) domain 1 176 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2982 Gso-Chr8 47514004 47518318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2982 21 451 Glycoside Hydrolase AT3G07070 56.347 1.63e-167 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gso8g2982 Pkinase 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2982 K13430 - gmx:100305422 902.123