Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2963 ATGGAGTGTGAAGTTGAATTACAAGGGGGAGATCTGCATGCAGGGGAGGTAACTGACCCAAACCCTATTGGTTTTGGCAACATGGAAGATGAACACACTTTGGCGGTTGCTGAGAGAGAGATGTGGCTGAACAGTGACCAAGACGAGTTCCTAGGTGTCAATGATGCTTCCATGTTCTACGCTGATTTCCCTCCTCTCCCTGATTTCCCTTGCATGTCATCATCATCATCTTCATCTTCAGCAACACCACTTCCCGTGAAGACCATGACATGTTCCACCACCACCACCACTTCCTCTTCTTCCTCTTCCTCTTCTTGGGCCATGTTGAAGTCAGATGCTGAGGAAGATGCAGAGAAAAACCATTGCAACCGATACATGCATGACCAACTTGATGCAACTTTGTCTTCCACCGCTTCCATGGAGATTTCTCAACAGCAAAACCCTGATCCTGGCCTTGGTGGCACTGTTGGAGAGTGCATGGATGATGTTATGGACACTTTTGGTTACATGGAGCTTTTGGAGGCCAATGATTTCTTTGACCCTGCCTCTATCTTTCAGAACGAGGGTAACGAAAACCCTTTAGAGGAGTTTGGCACACTGGAGGAGCATGTGCCGTTTCATGAAGAGCAACATGCAATGGTGCATCATCAGCAAGGGCAAGCAGAAGAGGAAGATCATCAGGTTCCTTTTTGTGAAGAGATCCAAGGAGATGAAGAAGGTGGTGATGGTGTTGGAGTAGATGATGAGATGAGTAATGTGTTCTTGGAGTGGCTTAAGTCTAACAAGGATAGTGTCTCAGCTAATGACTTGAGGAATGTGAAGCTCAAGAAGGCGACACTCGAAAGCGCGGCGAGGCGGCTAGGGGGAGGAAAAGAAGCCATGAAGCAGTTGCTGAAGCTGATTCTTGAGTGGGTTCAAACCAGCCATCTTCAGAATAAGCGCCGAAAGGAGAATAATGGTAGTAGTATTAGCAGTGTACTTCAGGCACAGTTTCAGGATCCTAGTGGCCAGAACAACAACCAGAATACACAAAGTGGTTCATTTGCACCTGAATCAAACACTTGTTTCAACAACCAAACACCATGGTTGAGTTCTCAAACTTTTGCAACAGATCAGGCTCCTCTCATGGTGCCTCCACAGCAATTTCCACAACCCATGGTTGGGTATGTGGGTGACCCTTACACTAGTGGTGCTGCTTCAAATAACATATCAGCCACTCATAACCATAACAACAGCAACCCTTATCAACCTGGTGCAGAACAATACCACATGTTGGAGTCAGCACATTCATGGCCACATTCTCTGTTCAATGTTGCTTCTAACTATAGTCAGTCTTTTGGGGACAATAATGGTCTTAACCCACATGGGGGTTTCGGTGGTGGAGGCTATGGCAATAACCAGTACCCTTATCAGTTTTTTCATGGCCCTGGTGATAGGTTGATGAGGTTGGGGCCCTCCGCGACGAAGGAAGCGAGGAAGAAGAGAATGGCAAGGCAAAGAAGGTTTCTGTCTCATCACAGGCATCATAGTGGTAATCACCAGAATCAAGGGTCTGACCCTCATGCAAGAATGGGGGGTGATAATTGCAACACTGCTTTGGCTGCACCTCATCACGCAAATCCTTCAGCCAATTGGATGTACTGGCAGGCTATGATTGGCGGCGCGGCAGGTCCTTTGGCTCCGGTGATTCCGGCCGAGCCGCCGGTGGTACAACCGGTCGTGGACCGGTCGGCCATGCAGACACAGAATTGTCATCAGAATCGAGTTGCATCAGATAGGAGACAGGGTTGGAAGCCTGAGAAGAACTTGAGGTTCCTTCTGCAGAAGGTGTTGAAACAAAGCGATGTTGGAAGTTTGGGGAGAATAGTTTTGCCAAAAAAAGAGGCAGAAACCCATTTGCCAGAGCTGGAGGCAAGAGATGGAATTTCCATAACAATGGAAGACATTGGAACTTCACGTGTTTGGAACATGCGCTATAGATACTGGCCGAACAACAAAAGCAGAATGTATTTGCTCGAGAACACTGGTGACTTTGTGAGAGCCAATGGACTCCAAGAGGGAGATTTCATAGTGATATACTCAGATGTGAAGTGTGGCAAATATATGATAAGAGGAGTGAAAGTGAGGCAACAAGGTGTGAAACCAGAGACCAAGAAAGCAGGAAAATCGCAGAAAAACCAGCATGGGACAGGGACTAATGCATCAAGTACAGCTGGTACTGCTGCTAATAATGGCACGTCATCGTCACCGAAAACCAAATCTGAAAAAAGTAGTAAATTAATATAA 2286 0.4685 MECEVELQGGDLHAGEVTDPNPIGFGNMEDEHTLAVAEREMWLNSDQDEFLGVNDASMFYADFPPLPDFPCMSSSSSSSSATPLPVKTMTCSTTTTTSSSSSSSSWAMLKSDAEEDAEKNHCNRYMHDQLDATLSSTASMEISQQQNPDPGLGGTVGECMDDVMDTFGYMELLEANDFFDPASIFQNEGNENPLEEFGTLEEHVPFHEEQHAMVHHQQGQAEEEDHQVPFCEEIQGDEEGGDGVGVDDEMSNVFLEWLKSNKDSVSANDLRNVKLKKATLESAARRLGGGKEAMKQLLKLILEWVQTSHLQNKRRKENNGSSISSVLQAQFQDPSGQNNNQNTQSGSFAPESNTCFNNQTPWLSSQTFATDQAPLMVPPQQFPQPMVGYVGDPYTSGAASNNISATHNHNNSNPYQPGAEQYHMLESAHSWPHSLFNVASNYSQSFGDNNGLNPHGGFGGGGYGNNQYPYQFFHGPGDRLMRLGPSATKEARKKRMARQRRFLSHHRHHSGNHQNQGSDPHARMGGDNCNTALAAPHHANPSANWMYWQAMIGGAAGPLAPVIPAEPPVVQPVVDRSAMQTQNCHQNRVASDRRQGWKPEKNLRFLLQKVLKQSDVGSLGRIVLPKKEAETHLPELEARDGISITMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKYMIRGVKVRQQGVKPETKKAGKSQKNQHGTGTNASSTAGTAANNGTSSSPKTKSEKSSKLI* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2963 761 MobiDBLite consensus disorder prediction 493 511 - -
Gso8g2963 761 SMART B3_2 607 709 IPR003340 GO:0003677
Gso8g2963 761 Pfam B3 DNA binding domain 608 704 IPR003340 GO:0003677
Gso8g2963 761 MobiDBLite consensus disorder prediction 711 761 - -
Gso8g2963 761 MobiDBLite consensus disorder prediction 724 755 - -
Gso8g2963 761 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 25 754 IPR044800 GO:0003700
Gso8g2963 761 CDD BfiI_C_EcoRII_N_B3 605 706 - -
Gso8g2963 761 SUPERFAMILY DNA-binding pseudobarrel domain 606 702 IPR015300 -
Gso8g2963 761 Gene3D - 603 722 IPR015300 -
Gso8g2963 761 MobiDBLite consensus disorder prediction 332 360 - -
Gso8g2963 761 MobiDBLite consensus disorder prediction 487 530 - -
Gso8g2963 761 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 25 754 - -
Gso8g2963 761 Coils Coil 761 761 - -
Gso8g2963 761 ProSiteProfiles B3 DNA-binding domain profile. 607 709 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2963 Gso-Chr8 47270760 47275225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2963 39 756 B3 DNA Binding Superfamily AT3G24650 47.150 8.13e-167 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gso8g2963 B3 3.9e-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2963 - - gmx:100795226 1442.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1427 18 41582538 41587022 Gso8g2963 8 47270760 47275225 GST