Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2960 ATGGCGTTTCTGAACCCTTTCTCTCTCCACATTCCCATGTCCTTGTTGCTCTTCCTCCTCTTCTTTTTTTGCTTCTGCAAAGCCAGTACTACTACTACCACCTCTACTACAACAAAGTCACTGTCCCCTTCTTCTTCACCCTCCACCACTACTTCCTCCTCTGATGTTCAACTTCTCTTGGGAAAGATCAAAGCTTCACTGCAAGGTAGTAACTCTGACAACCTTGTTTTGTCTTCATGGAACTCCTCCACCCCACTTTGTCAGTGGAGTGGCCTCAAATGGGTCTTCTCCAATGGCACTCCTCTCTCATGCACTGACTTGTCCTCTCCACAATGGACCAATCTCACTCTCCACAAAGACCCTTCTCTTCACTTGCTTTCCCTTCGGCTCCCTTCTGCAAACCTCTCTGGTTCCCTCCCCAGAGAGCTTGGAGGGTTCCCTATGCTCCAAAGTCTCTACCTTAACATAAACTCATTGGAGGGTACCATCCCTCTTGAGCTTGGTTATAGCTCCTCCCTCTCTGAGATTGATTTGGGTGACAATATGCTAAGTGGGGTTCTTCCACCCTCCATTTGGAACTTGTGTGAGAGGCTTGTTTCCCTTAGGCTCCATGGTAATTCCTTATCTGGGTCAGTTTCTGAGCCTGCATTGCCTAACTCTTCTTGCAAGAATATGCAGTTGCTTGATTTGGGTGGCAACAAGTTCTCTGGGAGTTTCCCTGAGTTCATCACAAAGTTTGGTGGCCTAAAGCAGCTTGACTTGGGGAACAACATGTTTATGGGGACAATTCCTCAAGGCCTAACTGGGCTTAGGCTTGAAAAATTGAATCTTTCACACAATAACTTTAGCGGGGTTTTGCCTTTGTTTGGAGGAGAATCCAAGTTTGGTGTGGATGCTTTTGAGGGTAATAGCCCTAGCCTGTGTGGACCACCTTTGGGAAGCTGTGCCAGGACCTCTACACTGAGTTCTGGTGCTGTTGCTGGCATTGTTATTAGTCTGATGACTGGTGCTGTAGTTTTGGCTTCTTTGCTGATAGGGTATATGCAGAACAAGAAGAGGGAGGGGAGTGGGGAGAGTGAGGATGAGTTGAATGATGAAGAGGAAGATGATGAAGATAATGGTGGCAATGCTATTGGTGGAGCTGGTGAGGGGAAGCTCATGTTGTTTGCTGGAGGTGAGAATTTGACATTGGATGATGTGTTGAATGCAACTGGGCAGGTTTTGGAGAAGACTTGTTATGGGACAGCTTATAAGGCTAAGCTTGCTGAAGGAGGCACCATTGCTTTGAGGTTGTTGAGAGAAGGTAGCTGCAAAGACAAGGCTTCTTGCTTGTCTGTTATAAGGCAATTGGGGAAAATTCGCCATGAGAATTTGATTCCTTTGAGAGCTTTCTATCAGGGGAAGAGAGGGGAGAAGCTCCTTATTTATGACTACCTGCCTCTCAGAACCCTTCATGATCTTTTACATGAAGCTAAAGCTGGAAAACCTGTGCTGAACTGGGCTAGGCGACACAAGATTGCGTTGGGCATGGCAAGAGGTCTAGCTTATCTTCATACAGGACTTGAAGTTCCTGTCACTCATGCAAACGTAAGGTCCAAGAATGTGCTCGTGGACGACTTCTTTGCGGCCAGGCTCACTGATTTCGGCCTCGACAAGCTGATGATTCCATCCATAGCCGACGAAATGGTGGCGCTTGCCAAGACGGATGGCTACAAGGCTCCGGAGCTTCAAAGAATGAAGAAATGCAACTCCAGGACTGACGTTTATGCGTTCGGCATACTGCTGCTTGAAATCTTGATTGGGAAGAAGCCTGGGAAGAACGGAAGAAATGGGGAGTATGTGGACTTGCCTTCAATGGTGAAAGTGGCAGTTTTGGAGGAGACGACAATGGAAGTGTTTGATGTCGAACTTCTGAAAGGGATAAGAAGTCCTATGGAAGACGGGTTGGTGCAGGCACTGAAGCTGGCAATGGGGTGCTGTGCACCAGTGGCATCTGTTAGGCCAAGCATGGATGAAGTTGTGAGGCAATTGGAGGAGAATAGACCAAGGAACAGGTCTGCATTATACAGCCCTACAGAAACAAGAAGTGGAAGTGTTACCCCATTTTGA 2109 0.4737 MAFLNPFSLHIPMSLLLFLLFFFCFCKASTTTTTSTTTKSLSPSSSPSTTTSSSDVQLLLGKIKASLQGSNSDNLVLSSWNSSTPLCQWSGLKWVFSNGTPLSCTDLSSPQWTNLTLHKDPSLHLLSLRLPSANLSGSLPRELGGFPMLQSLYLNINSLEGTIPLELGYSSSLSEIDLGDNMLSGVLPPSIWNLCERLVSLRLHGNSLSGSVSEPALPNSSCKNMQLLDLGGNKFSGSFPEFITKFGGLKQLDLGNNMFMGTIPQGLTGLRLEKLNLSHNNFSGVLPLFGGESKFGVDAFEGNSPSLCGPPLGSCARTSTLSSGAVAGIVISLMTGAVVLASLLIGYMQNKKREGSGESEDELNDEEEDDEDNGGNAIGGAGEGKLMLFAGGENLTLDDVLNATGQVLEKTCYGTAYKAKLAEGGTIALRLLREGSCKDKASCLSVIRQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLPLRTLHDLLHEAKAGKPVLNWARRHKIALGMARGLAYLHTGLEVPVTHANVRSKNVLVDDFFAARLTDFGLDKLMIPSIADEMVALAKTDGYKAPELQRMKKCNSRTDVYAFGILLLEILIGKKPGKNGRNGEYVDLPSMVKVAVLEETTMEVFDVELLKGIRSPMEDGLVQALKLAMGCCAPVASVRPSMDEVVRQLEENRPRNRSALYSPTETRSGSVTPF* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2960 702 Gene3D Ribonuclease Inhibitor 54 220 IPR032675 -
Gso8g2960 702 Gene3D Ribonuclease Inhibitor 221 319 IPR032675 -
Gso8g2960 702 Pfam Protein tyrosine and serine/threonine kinase 406 677 IPR001245 GO:0004672|GO:0006468
Gso8g2960 702 Gene3D Transferase(Phosphotransferase) domain 1 481 690 - -
Gso8g2960 702 SUPERFAMILY Protein kinase-like (PK-like) 406 678 IPR011009 -
Gso8g2960 702 ProSiteProfiles Protein kinase domain profile. 402 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2960 702 SUPERFAMILY L domain-like 91 288 - -
Gso8g2960 702 MobiDBLite consensus disorder prediction 360 374 - -
Gso8g2960 702 Pfam Leucine rich repeat 224 282 IPR001611 GO:0005515
Gso8g2960 702 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 15 702 - -
Gso8g2960 702 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 15 702 - -
Gso8g2960 702 MobiDBLite consensus disorder prediction 354 377 - -
Gso8g2960 702 MobiDBLite consensus disorder prediction 681 702 - -
Gso8g2960 702 Gene3D Phosphorylase Kinase; domain 1 390 478 - -
Gso8g2960 702 MobiDBLite consensus disorder prediction 683 702 - -
Gso8g2960 702 MobiDBLite consensus disorder prediction 34 53 - -
Gso8g2960 702 Pfam Leucine rich repeat N-terminal domain 54 91 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2960 Gso-Chr8 47238855 47242104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2960 9 702 Receptor kinase-like Gene Family AT3G24660 70.647 0.0 930
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso8g2960 PK_Tyr_Ser-Thr 6.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2960 - - gmx:100814814 1245.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1424 18 41505370 41508454 Gso8g2960 8 47238855 47242104 GST