Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2944 ATGAGTTGCTTTTCATGTTTTACGTCCAATGAAAAGAAAGTAGCAAAGAAGCCTAACAATGGGCAGAGGATACAACAGCCTGCTATTAATTCTCCCAAGGAATCAGCCCAACCAGTTCAGCCACGGCCAGATAATAATTTTAACAAGGCAAAGGCCACCCCACAAACAGAACCTAAAATAAACAAGGAGGCCAACAAAGATAATGGGAACAACAACAACAACATTGCTGCCCAAACATTCACCTTCAGGGAATTGGCTTCTATCACAAAGAACTTCAGACAGGAATGCCTAATTGGTGAAGGTGGTTTTGGAAGGGTTTATAAAGGAAGACTTGAAAAAACCAACCAGGAAGTAGCTGTGAAGCAACTTGACAGGAATGGATTACAAGGGAATAGAGAGTTTCTTGTTGAAGTTTTAATGTTGAGTCTCTTGCACCATCAAAATCTAGTGAATCTAATTGGATATTGTGCTGATGGAGATCAGAGATTATTGGTGTATGAGTACATGCCATTGGGATCTCTTGAGGACCATCTGCTTGATGTTCATCCACAACAAAAGCATCTAGATTGGTTCATCAGAATGAAAATAGCTTTGGATGCTGCAAAAGGTCTAGAGTATTTGCATGACAAGGCGAATCCTCCAGTCATCTACCGCGACTTAAAATCCTCCAACATCTTGCTAGACAAAGAGTTCAATGCAAAACTCTCTGATTTTGGACTAGCAAAGTTGGGACCAACAGGGGACAAGTCTCATGTCTCTTCAAGAGTAATGGGTACTTATGGATACTGTGCACCTGAGTATCAAAGAACTGGTCAGCTAACTGTAAAATCAGATGTGTACAGCTTTGGTGTTGTTTTGCTTGAATTGATCACTGGAAGGAGAGCCATTGATAACACAAGACCAACAAGGGAGCAAAATCTAGTTACTTGGGCATATCCAGTATTCAAGGACCCTCACAGATACTCAGAGTTAGCAGACCCCCTTCTGCAAGCAAACTTCCCAATGAGATCACTGCATCAAGCAGTGGCAGTAGCAGCCATGTGCCTCAATGAGGAGCCATCAGTGAGGCCCTTGATCAGTGATGTTGTCACTGCTCTTACTTTCCTTGGAACAGCTCCAGGGAGCCAAGACCTCACAGGAATTGCACCTGTTGACCTGCCCTCACCACCACAAGAAGCCATTAGTAGTGCCCCTTTCAATCTTCTCGACGACGATGTCGTCATGGATCGCCAAAGGGCTGTTGCTGAAGCCATTGAATGGGGTACAAACAGTAGGAACAAAGCACCACTACGTGACAGTTCTACCTCTTTGTAA 1314 0.4353 MSCFSCFTSNEKKVAKKPNNGQRIQQPAINSPKESAQPVQPRPDNNFNKAKATPQTEPKINKEANKDNGNNNNNIAAQTFTFRELASITKNFRQECLIGEGGFGRVYKGRLEKTNQEVAVKQLDRNGLQGNREFLVEVLMLSLLHHQNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLLDVHPQQKHLDWFIRMKIALDAAKGLEYLHDKANPPVIYRDLKSSNILLDKEFNAKLSDFGLAKLGPTGDKSHVSSRVMGTYGYCAPEYQRTGQLTVKSDVYSFGVVLLELITGRRAIDNTRPTREQNLVTWAYPVFKDPHRYSELADPLLQANFPMRSLHQAVAVAAMCLNEEPSVRPLISDVVTALTFLGTAPGSQDLTGIAPVDLPSPPQEAISSAPFNLLDDDVVMDRQRAVAEAIEWGTNSRNKAPLRDSSTSL* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2944 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Gso8g2944 437 Gene3D Phosphorylase Kinase; domain 1 61 168 - -
Gso8g2944 437 Pfam Protein kinase domain 94 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2944 437 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL26-RELATED 2 428 - -
Gso8g2944 437 SUPERFAMILY Protein kinase-like (PK-like) 78 383 IPR011009 -
Gso8g2944 437 ProSitePatterns Protein kinases ATP-binding region signature. 98 121 IPR017441 GO:0005524
Gso8g2944 437 Gene3D Transferase(Phosphotransferase) domain 1 169 374 - -
Gso8g2944 437 SMART serkin_6 92 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2944 437 PANTHER OS07G0668900 PROTEIN 2 428 - -
Gso8g2944 437 MobiDBLite consensus disorder prediction 1 74 - -
Gso8g2944 437 CDD STKc_IRAK 98 367 - -
Gso8g2944 437 ProSiteProfiles Protein kinase domain profile. 92 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2944 Gso-Chr8 47066548 47070137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2944 1 425 Glycoside Hydrolase AT3G07070 67.832 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gso8g2944 Pkinase 2.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2944 - - gmx:100786405 854.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1392 18 40137455 40141096 Gso8g2944 8 47066548 47070137 GST