Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2943 ATGGCTTTCTCTATCTCACTCTTTTTATTAGTCCTGCTTTTTTCTTTCCAATCTTCTTCATCTTCCCTATTGTCATTGAACAAGGGGTCCTCCCTCTCAGTGGAGAAACACGCAGAAGACGTTATTGTCTCCCCAAATCAAATGTTCTGTGCTGGCTTCTTTCAAGTTGGTGAAAATGCCTTCTCCTTTGCCATATGGTTCAACGACCCTCACACTCACAACAACAACCACACCGTGGTTTGGATGGCAAACCGTGAACAACCCGTTAATGGAAGGCTGTCAAAGCTTTCCCTCTTAAACAGTGGTAACATGGTCTTGGTTGATGCAGGTCAAATCACCAAATGGTCATCAAACACAGCGTCACATGCTCCAGTAAAGTTGCATCTCCAAGATGATGGCAATCTTGTGTTACTTGATCTCCAAGGAACCATTTTGTGGCAAAGTTTTGATACCCCAACTGATACTCTCCTTCCCGGTCAATTACTTACCAGACACACACAACTAGTGTCTTCAAGAAGCCAGACTAACCATTCTCCTGGTTTCTATAAGATGCTATTTGATGATGACAACGTTCTTCGTCTTATTTATGATGGTCCTGATGTCTCAAGCACATATTGGCCACCACCATGGCTACTCAGTTGGCAAGCTGGAAGGTTTAATTACAACAGCAGCAGAGTTGCAGTGTTAAATTCTATTGGAAATTTCACTTCATCGGATAATTATGATTTTTCCACGGATGATCATGGCACGGTGATGCCAAGAAGATTAAAACTGGATTCAGATGGAAACGCTCGTGTGTACAGTAGAAATGAGGCTTTAAAGAAATGGTATGTTTCATGGCAATTCATATTTGATACATGCACCATTCATGGGATTTGTGGTGCTAACAGCACTTGCAGTTATGATCCTAAAAGGGGACGGAGATGCTCGTGTTTACCAGGATATAGAGTGAAGAACCATAGTGATTGGTCTTACGGGTGTGAACCCATGTTTGATCTTGCTTGCAGCGGAAATGAGTCTATCTTTTTGGAGATACAGGGCGTTGAGTTATATGGTTATGATCACAAATTTGTCCAAAACAGTACATACATAAACTGTGTGAATTTGTGTTTGCAAGATTGTAACTGCAAAGGGTTTCAGTACAGATATGATGGTAACCAAATATTTAGCTGCTATACAAAGTTACAGTTGTGGAATGGAAGGCGTTCACCAAGTTTTAATGGAACAATTAACTTGAGACTTCCCAACAGCAATAACTTCTCCAAGGAAGAATCTGAGAGTGCAGATGATCATGTTTGTTCTGTGCAGCTTCACAAAGACTATGTCAGAAAAGCAGCAAATCGTTTTGAGAGATTTTCTCTGTGGCTTGCTACTGCAGTTGGAGCTTTAGAAATGATTTGCCTTTTGATGATTTGGGGTTTCTTGATTAGGTCCCAGCAAAAGTCTAGTGCAAATAAACTAGGCTACCATCTTGCAGCAGTGGGAATCAGAAAATATAGTTATTCTGAGTTGAAGAAGGCAACAGAGGGGTTCAGCCAAGAAATTGGAAGGGGTGCGGGAGGGGTTGTGTACAAAGGCATTTTATCAGATCAAAGACATGCTGCAATTAAGAGACTCTATGATGCTAAACAAGGAGAAGGGGAATTCCTTGCTGAGGTGAGCATCATTGGAAGGCTTAACCACATGAACTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAATCATAGGTTGCTGGTGTGTGAGTACATGGGAAATGGTTCTTTGGAAGAAAATCTCTCATCTAACACACTTGATTGGAGTAAGAGATATAACATTGCTCTGGGAGTGGCAAGAGTTCTAGCATATCTGCATGAAGAATGCTTGGAGTGGATTTTGCACTGTGATATAAAGCCCCAAAACATACTTCTTGATGCTAGTTATCAGCCCAAGGTAGCAGATTTTGGCTTGTCCAAGCTACTAAACAGAGATAACCTCCACAGCAATTCAACTGTTTCAATGATCAGAGGAACTCGAGGATATATGGCACCTGAGTGGGTTTACAATTTACCAATCACCTCTAAAGTGGATGTTTACAGCTACGGAATTGTTCTCTTGCAGATGATAACTGGAAAAAGCCCAACAACCGGTGTCCAAAGCATTGATGGAGAAGAATCACATAATGGAAGGCTGGTAACTTGGGTGAGAGAGAAAAGGAGTGCCACATCTTGGCTAGAGCAAATAATGGATCCAGCAATCAAAACAAATTATGATGAACGCAAGATGGACCTTTTGGCCAGAGTGGCTCTGGATTGTGTTGAGGAAAAGAAAGATTCGAGACCCACCATGAGCCAAGTAGTCGAAATGCTTCAAAGCCATGAAACTAATTAA 2370 0.4152 MAFSISLFLLVLLFSFQSSSSSLLSLNKGSSLSVEKHAEDVIVSPNQMFCAGFFQVGENAFSFAIWFNDPHTHNNNHTVVWMANREQPVNGRLSKLSLLNSGNMVLVDAGQITKWSSNTASHAPVKLHLQDDGNLVLLDLQGTILWQSFDTPTDTLLPGQLLTRHTQLVSSRSQTNHSPGFYKMLFDDDNVLRLIYDGPDVSSTYWPPPWLLSWQAGRFNYNSSRVAVLNSIGNFTSSDNYDFSTDDHGTVMPRRLKLDSDGNARVYSRNEALKKWYVSWQFIFDTCTIHGICGANSTCSYDPKRGRRCSCLPGYRVKNHSDWSYGCEPMFDLACSGNESIFLEIQGVELYGYDHKFVQNSTYINCVNLCLQDCNCKGFQYRYDGNQIFSCYTKLQLWNGRRSPSFNGTINLRLPNSNNFSKEESESADDHVCSVQLHKDYVRKAANRFERFSLWLATAVGALEMICLLMIWGFLIRSQQKSSANKLGYHLAAVGIRKYSYSELKKATEGFSQEIGRGAGGVVYKGILSDQRHAAIKRLYDAKQGEGEFLAEVSIIGRLNHMNLIEMWGYCAEGNHRLLVCEYMGNGSLEENLSSNTLDWSKRYNIALGVARVLAYLHEECLEWILHCDIKPQNILLDASYQPKVADFGLSKLLNRDNLHSNSTVSMIRGTRGYMAPEWVYNLPITSKVDVYSYGIVLLQMITGKSPTTGVQSIDGEESHNGRLVTWVREKRSATSWLEQIMDPAIKTNYDERKMDLLARVALDCVEEKKDSRPTMSQVVEMLQSHETN* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2943 789 ProSiteProfiles PAN/Apple domain profile. 335 417 IPR003609 -
Gso8g2943 789 CDD STKc_IRAK 515 784 - -
Gso8g2943 789 CDD B_lectin 42 152 IPR001480 -
Gso8g2943 789 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 3 788 - -
Gso8g2943 789 Gene3D - 153 278 IPR036426 -
Gso8g2943 789 Gene3D Phosphorylase Kinase; domain 1 474 583 - -
Gso8g2943 789 Gene3D - 24 151 IPR036426 -
Gso8g2943 789 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 3 788 - -
Gso8g2943 789 Gene3D Transferase(Phosphotransferase) domain 1 584 789 - -
Gso8g2943 789 SMART serkin_6 509 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2943 789 ProSiteProfiles Bulb-type lectin domain profile. 17 150 IPR001480 -
Gso8g2943 789 ProSiteProfiles EGF-like domain profile. 283 321 IPR000742 -
Gso8g2943 789 SMART blect_4 33 152 IPR001480 -
Gso8g2943 789 Pfam PAN-like domain 335 384 IPR003609 -
Gso8g2943 789 ProSitePatterns Protein kinases ATP-binding region signature. 515 537 IPR017441 GO:0005524
Gso8g2943 789 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Gso8g2943 789 Pfam S-locus glycoprotein domain 214 318 IPR000858 GO:0048544
Gso8g2943 789 CDD PAN_AP_plant 331 415 - -
Gso8g2943 789 PIRSF SRK 1 789 IPR024171 GO:0004674
Gso8g2943 789 SUPERFAMILY Protein kinase-like (PK-like) 487 783 IPR011009 -
Gso8g2943 789 ProSiteProfiles Protein kinase domain profile. 509 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2943 789 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 206 IPR036426 -
Gso8g2943 789 Pfam Protein kinase domain 512 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2943 789 Pfam D-mannose binding lectin 78 167 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2943 Gso-Chr8 47055728 47058658 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2943 499 787 Trihelix Transcription Factor Family AT5G38560 41.275 1.05e-62 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso8g2943 Pkinase 2.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2943 - - gmx:100785351 1576.99