Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2920 ATGGCTAGAAACTTTGGAGGGAGTGAAGATCAGGCCTATACAAACAGGGTTGTTGGAACCTATGGCTATATGTCCCCTGAATATGCAATGCAAGGACTAATTTCAGAGAAATCAGATGTCTTTAGCTTTGGTGTTTTGGTACTAGAGATTGTTAGTGGAAGAAGAAACTCAAGATTTTATGATGATGAGAATGGTCTTGGCCTTTTAGGATTTGCCTGGATACAATGGAAGGAAGGCAACATATTATCTCTAATAGATAGCAATATATGA 270 0.3815 MARNFGGSEDQAYTNRVVGTYGYMSPEYAMQGLISEKSDVFSFGVLVLEIVSGRRNSRFYDDENGLGLLGFAWIQWKEGNILSLIDSNI* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2920 89 ProSiteProfiles Protein kinase domain profile. 1 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2920 89 SUPERFAMILY Protein kinase-like (PK-like) 2 58 IPR011009 -
Gso8g2920 89 Gene3D Transferase(Phosphotransferase) domain 1 1 89 - -
Gso8g2920 89 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 1 88 - -
Gso8g2920 89 Pfam Protein tyrosine and serine/threonine kinase 14 54 IPR001245 GO:0004672|GO:0006468
Gso8g2920 89 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2920 Gso-Chr8 46799377 46800237 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2920 1 89 Receptor kinase-like Gene Family AT4G11530 57.778 2.42e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso8g2920 PK_Tyr_Ser-Thr 8.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2920 - - gmx:113002360 182.956