Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2919 ATGGGTTTCAGCAGCCGTGCAAACTTGTTCTTTGTATTGCTTATGTTATGTTGTTGTGTGTTGGATGTTGGTATTGCCATAGACACCATCACCTCATCTCAGTCCATCAAGGACCCTGAAGTTCTAACTTCCAAAGATGGTAACTTCACTTTGGGGTTCTTCACCCCTCAAAACTCCACAAACCGCTATGTTGGAATTTGGTGGAAATCTCAATCCACAATCATATGGGTTGCTAACAGAAACCAACCACTGAATGATTCTTCTGGAATTGTTACAATCCATGAAGATGGCAATCTTGTATTGCTTAAGGGACAGAAACAAGTAATTTGGACAACAAATCTGTCCAACTCGTCATCCAATAGAACTTCCCAGTTTTCAGATTATGGTAAGCTTGTCCTCACCGAAGCCACAACGGGAAACATCTTGTGGGATAGTTTTCAGCAACCTTCAAATACATTATTGCCCGGCATGAAACTTTCAACAAATAATAGTACAGGTAAGAAAGTAGAGCTTACATCGTGGAAAAGCCCTTCTAATCCGTCCGTTGGGAGCTTCTCTTCTGGTGTCGTTCAAGGCATAAACATAGTTGAAGTGTTCATTTGGAATGAAACTCAACCATATTGGCGCAGTGGTCCATGGAATGGCAGGCTCTTTACGGGGATACAGAGCATGGCAACTTTGTATCGTACTGGTTTTCAAGGTGGAAATGATGGGGAAGGATATGCAAATATCTACTATACAATACCAAGTTCATCAGAGTTTTTAATCTATATGTTGAATTTGCAAGGCCAATTATTACTAACAGAGTGGGATGATGAGAGGAAAGAAATGGAAGTTACATGGACTAGTCAAGACTCAGATTGTGATGTTTATGGTATATGTGGATCGTTCGCAATCTGTAATGCACAGAGTTCTCCCATATGTAGTTGCTTGAAAGGGTTTGAGGCTAGGAACAAAGAGGAATGGAATAGACAAAACTGGACTGGTGGATGTGTTAGGAGAACACAATTGCAGTGTGAAAGGGTCAAAGATCACAACACAAGTACAGATACAAAAGAAGATGGATTTTTGAAACTGCAGATGGTTAAAGTTCCATATTTTGCAGAAGGGTCACCTGTTGAGCCAGACATATGCAGAAGCCAATGCTTGGAGAATTGCTCTTGTGTTGCGTATTCTCACGATGATGGGATTGGTTGCATGTCTTGGACTGGGAATCTACTTGACATACAACAATTCTCAGATGCAGGACTTGATCTATATGTTCGCATAGCCCACACTGAACTTGATAAAGGGAAAAACACAAAAATCATCATTATAATTACAGTGATAATAGGAGCTGTCGTCATTATTACTTGTTCTTGTGCATATGTCATGCGGAGGACTTCCAATCACCCAGCTAAAATATGGCACTTAATTAAATTAAGGAAAGGGAACAGGAATGGTTTTGTACAATCTAAATTTGATGAAACACCAGAACATCCAAGCCACAGAGTAATTGAAGAACTGACACAAGTTCAACAACAGGAGATGTTCGTATTTGATTTCAAAAGGGTTGCAACAGCCACAAACAACTTCCACCAATCCAACAAACTTGGCCAGGGTGGTTTCGGTCCAGTGTATAAGGGTAAACTGCAAGATGGACAGGAAATAGCAGTTAAAAGACTTTCTAGGGCCTCTGGACAAGGTCTAGAAGAATTCATGAATGAAGTTGTGGTGATTTCCAAGCTTCAACACCGCAATCTTGTAAGACTTTTTGGCTCTTGTATTGAAGGCGAAGAAAAGATGTTGTTATATGAATACATGCCAAATAAAAGTTTGGATGTGTTTATCTTTGATCCATCAAAAAGTAAACTCCTAGATTGGAGGAAACGCATTAGCATAATAGAAGGAATAGCTCGAGGATTGCTTTATCTTCACAGAGACTCCAGACTAAGAATCATACACAGAGATTTGAAGGCAAGTAATATCTTGTTAGATGAAGAGCTGAATCCAAAAATATCAGACTTTGGTATGGCTAGAATCTTTGGAGGGACTGAAGATCAGGCCAATACTCTCAGGGTTGTGGGAACCTATGGCTATATGTCCCCTGAATATGCAATGCAAGGACTGTTTTCAGAGAAATCAGATGTCTTTAGCTTTGGTGTTTTGGTACTAGAGATTGTTAGTGGAAGAAGAAACTCAAGCTTTTATGACAATGAGAATTTTCTTAGTCTTTTAGGATTTGCCTGGATACAATGGAAGGAAGGCAACATATTATCTCTAGTAGATCCGGGAACATATGATCCTAGTTATCATAAAGAAATTTTAAGGTGCATACACATAGGATTTCTATGTGTACAAGAACTTGCTGTAGAGAGACCCACAATGGCTACAGTAATTTCTATGCTTAACAGTGATGATGTGTTTCTTCCTCCTCCAAGTCAACCTGCATTTATCCTGAGGCAAAATATGTTGAATTCGGTGTCATCTGAGGAAATTCATAATTTTGTCTCCATCAATACTGTTAGTATTACAGATATTCATGGTAGATATTACGAAAACGTACAGATATTTGAAGACAATGGCTATATGTCCCCTGAATATGCAATGCAAGGACTAATTTCAGAGAAATCAGATGTCTTTAGCTTTGGTGTTTTGGTACTAGAGATTGTTAGTGGAAGAAGAAACTCAAGATTTTATGATGATGAGAATGGTCTTGGCCTTTTAGGATTTAGAGAATTGTCAAATCTTAAAAGAAGGAATAAAGAGTTTCCATATGGTTCATATTATTATGTAGATCTTATCTTATTCTATTCATCTAAAAAAAAAATGGGTTCCAGCAGCTGTGTAAAATTTTTCTTTGTATTCATACTGTGTTGCCATGTGTTGGACGTTGGTACTGCCATAGACACCATTACATCATCTCAATCCATAAAGGACACTGAAACTCTAACTTCCACGGATGGTAACTTTACTTTGGGGTTCTTCACCCCTCAAAACTCTACAAACCGCTACGTTGGAATTTGGTGGAAGTCTCAATCCACAGTAATTTGGGTTGCTAACAGAAACCAACCTCTGAATGATTCTTCTGGAATTGTTACAATATCTGAAGATGGCAATCTTGTGGTGCTTAATGGACACAAACAAGTCATTTGGTCGACAAATGTGTCCAAGACATCATTCAATACAAGCTCCCAGTTTTCAGATTCGGGTAAGCTTGTCCTCGCAGAAACAACAACTGGAAACATCTTATGGGACAGTTTTCAGCAACCTTCAAATACATTATTGCCCGGCATGAAACTTTCGATCAACAAAAGTACAGGTAAGAAAGTAGAACTTACATCATGGGAAAGCCCTTATAATCCCTCTGTTGGGAGCTTCTCTTCCAGCCTTGTTCAACGCAAAAATATAGTTGAATTGTTCATTTTCAATGGAACTCAACTCTACTGGCGCAGTGGTCCATGGAACGGTGGGATCTTTACAGGTATAGCGTACATGTCGACGTATCTTAATGGCTTCAAAGGTGGGGACGATGGGGAAGGAAACATAAACATCTATTACACAGTGTCAAGTGAATTAGGTCCATTGGGATTTTTAATCTATATGTTGAATTCGCAAGGCCGGTTGGAAGAAAAATGGTGGGATGATGAGAAGCAAGAAATGGGACTTATGTGGGCTAGTAGAAAATCAGATTGTGATATTTATGCTATATGTGGGTCGTTTGCAATCTGTAATGCACAGAGCTCACCAATATGCAGCTGTTTGAAAGGGTTTGAGCCAAGGAACAAAGAGGAATGGAATAGACAACATTGGACTAGTGGATGCGTTAGGAACACAGGTTTGCTGTGTGAAAGGGTCAAAGATCAAAACACAAGTATAGATACAAACGAAGATGGATTTTTGGAACTGCAAATGGTTAAAGTTCCAGATTTTCCAGAAAGATCTCCTGTTGATCCTGACAAGTGCAGAAGTCAATGCTTGGAGAATTGCTCTTGTGTTGCTTATTCTCATGAGGAAATGATTGGTTGTATGTCTTGGACTGGAAATCTACTTGACATACAACAATTCTCGAGTAATGGACTTGATCTATATGTTCGTGGAGCCTATACTGAACTTGAACATGATGAAGGGACAAACACAACAATCATCATTATAATTACAGTGACAATAGGAACTGTCTTCATTGTTATTTGTGCGTGTGCATATGTCATGTGGAGGACTTCCAATCACCCAGCTAAAATATGGCACTCGATCAAGTCAGGAAGGAAAAGGGGCAACAAATATTTGGCTCGTTTTAACAATGGGGTACCATCTGAACATACAAGCAACAAGGTAATTGAAGAACTGTCACAAGTTAAACTCCAGGAGCTGTTACTGTTTGATTTTGAAAGGGTTGTTGCAGCCACAAACAACTTCCACCTGTCCAACAAACTTGGGCAGGGTGGTTTTGGTCCGGTGTACAAGGGGAAATTGCCAGATGGACAGGAAATAGCAGTTAAAAGACTTTCTAGAGCCTCTGGACAAGGTCTAGAAGAATTCATGAATGAAGTAGTGGTGATTTCCAAGCTTCAACATCGTAATCTTGTAAAACTTTTTGGCTGTTGTGCTGAAGGTGATGAAAAGATGTTGATATATGAATACATGCTAAACAAAAGTTTGGATGTGTTTATCTTTGATCCATCAAAAAGTAAACTCCTAGATTGGAGGAAGCGCTGTGGCATAATAGAAGGAATAGGTCGAGGATTGCTTTATCTTCATAGAGACTCTAGGCTAAAAATCATACACAGAGATTTGAAGGCAAGCAATGTCTTATTAGATGAAGCGCTGAATCCAAAAATATCAGACTTTGGTATGGCTAGAATCTTTGGAGGAACTGAAGATCAGGCCAATACTAACAGGGTTGTTGGAACATATGGCTATATGTCCCCTGAATATGCAATGCAAGGACTGTTTTCAGAGAAATCAGATGTCTTTAGTTTTGGTGTTTTGGTAATAGAGATTGTTAGTGGAAGAAGGAACTCAAGATTTTACGACGACGACAATGCTCTTAGCCTTTTAGGATTTGCATGGATACAATGGAGGGAAGGCAACATATTATCTGTAATAGATCCAGAAATATATGATGTTACTCATCATAAAGATATTTTAAGGTGTATACACATAGGACTTCTATGTGTACAAGAACGTGCTGTAGACAGACCCACAATGGCTGCAGTAATTTCTATGCTTAACAGTGAGGTTGCATTTCTTCCTCCTCCAGATCAACCTGCATTCGTCCAGAGCCAAAATATGTTGAATTTGGTGTCAGTGTCATCTGAAGAAAGACAAAAATTATGCTCCATCAATGGTATTAGTATTACAGATATCCGTGGTAGATAG 5358 0.3908 MGFSSRANLFFVLLMLCCCVLDVGIAIDTITSSQSIKDPEVLTSKDGNFTLGFFTPQNSTNRYVGIWWKSQSTIIWVANRNQPLNDSSGIVTIHEDGNLVLLKGQKQVIWTTNLSNSSSNRTSQFSDYGKLVLTEATTGNILWDSFQQPSNTLLPGMKLSTNNSTGKKVELTSWKSPSNPSVGSFSSGVVQGINIVEVFIWNETQPYWRSGPWNGRLFTGIQSMATLYRTGFQGGNDGEGYANIYYTIPSSSEFLIYMLNLQGQLLLTEWDDERKEMEVTWTSQDSDCDVYGICGSFAICNAQSSPICSCLKGFEARNKEEWNRQNWTGGCVRRTQLQCERVKDHNTSTDTKEDGFLKLQMVKVPYFAEGSPVEPDICRSQCLENCSCVAYSHDDGIGCMSWTGNLLDIQQFSDAGLDLYVRIAHTELDKGKNTKIIIIITVIIGAVVIITCSCAYVMRRTSNHPAKIWHLIKLRKGNRNGFVQSKFDETPEHPSHRVIEELTQVQQQEMFVFDFKRVATATNNFHQSNKLGQGGFGPVYKGKLQDGQEIAVKRLSRASGQGLEEFMNEVVVISKLQHRNLVRLFGSCIEGEEKMLLYEYMPNKSLDVFIFDPSKSKLLDWRKRISIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMARIFGGTEDQANTLRVVGTYGYMSPEYAMQGLFSEKSDVFSFGVLVLEIVSGRRNSSFYDNENFLSLLGFAWIQWKEGNILSLVDPGTYDPSYHKEILRCIHIGFLCVQELAVERPTMATVISMLNSDDVFLPPPSQPAFILRQNMLNSVSSEEIHNFVSINTVSITDIHGRYYENVQIFEDNGYMSPEYAMQGLISEKSDVFSFGVLVLEIVSGRRNSRFYDDENGLGLLGFRELSNLKRRNKEFPYGSYYYVDLILFYSSKKKMGSSSCVKFFFVFILCCHVLDVGTAIDTITSSQSIKDTETLTSTDGNFTLGFFTPQNSTNRYVGIWWKSQSTVIWVANRNQPLNDSSGIVTISEDGNLVVLNGHKQVIWSTNVSKTSFNTSSQFSDSGKLVLAETTTGNILWDSFQQPSNTLLPGMKLSINKSTGKKVELTSWESPYNPSVGSFSSSLVQRKNIVELFIFNGTQLYWRSGPWNGGIFTGIAYMSTYLNGFKGGDDGEGNINIYYTVSSELGPLGFLIYMLNSQGRLEEKWWDDEKQEMGLMWASRKSDCDIYAICGSFAICNAQSSPICSCLKGFEPRNKEEWNRQHWTSGCVRNTGLLCERVKDQNTSIDTNEDGFLELQMVKVPDFPERSPVDPDKCRSQCLENCSCVAYSHEEMIGCMSWTGNLLDIQQFSSNGLDLYVRGAYTELEHDEGTNTTIIIIITVTIGTVFIVICACAYVMWRTSNHPAKIWHSIKSGRKRGNKYLARFNNGVPSEHTSNKVIEELSQVKLQELLLFDFERVVAATNNFHLSNKLGQGGFGPVYKGKLPDGQEIAVKRLSRASGQGLEEFMNEVVVISKLQHRNLVKLFGCCAEGDEKMLIYEYMLNKSLDVFIFDPSKSKLLDWRKRCGIIEGIGRGLLYLHRDSRLKIIHRDLKASNVLLDEALNPKISDFGMARIFGGTEDQANTNRVVGTYGYMSPEYAMQGLFSEKSDVFSFGVLVIEIVSGRRNSRFYDDDNALSLLGFAWIQWREGNILSVIDPEIYDVTHHKDILRCIHIGLLCVQERAVDRPTMAAVISMLNSEVAFLPPPDQPAFVQSQNMLNLVSVSSEERQKLCSINGISITDIRGR* 1786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2919 1785 SUPERFAMILY alpha-D-mannose-specific plant lectins 999 1115 IPR036426 -
Gso8g2919 1785 ProSiteProfiles PAN/Apple domain profile. 339 424 IPR003609 -
Gso8g2919 1785 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Gso8g2919 1785 CDD STKc_IRAK 531 797 - -
Gso8g2919 1785 Gene3D Transferase(Phosphotransferase) domain 1 1541 1742 - -
Gso8g2919 1785 Gene3D Transferase(Phosphotransferase) domain 1 601 801 - -
Gso8g2919 1785 CDD B_lectin 968 1084 IPR001480 -
Gso8g2919 1785 CDD PAN_AP_plant 335 424 - -
Gso8g2919 1785 CDD B_lectin 33 149 IPR001480 -
Gso8g2919 1785 Pfam S-locus glycoprotein domain 1143 1254 IPR000858 GO:0048544
Gso8g2919 1785 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Gso8g2919 1785 Gene3D Phosphorylase Kinase; domain 1 1427 1540 - -
Gso8g2919 1785 Gene3D Phosphorylase Kinase; domain 1 489 600 - -
Gso8g2919 1785 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 21 841 - -
Gso8g2919 1785 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 956 1783 - -
Gso8g2919 1785 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 850 904 - -
Gso8g2919 1785 CDD PAN_AP_plant 1287 1361 - -
Gso8g2919 1785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Gso8g2919 1785 SMART blect_4 33 149 IPR001480 -
Gso8g2919 1785 SMART blect_4 968 1084 IPR001480 -
Gso8g2919 1785 Pfam PAN-like domain 351 409 IPR003609 -
Gso8g2919 1785 Pfam PAN-like domain 1288 1346 IPR003609 -
Gso8g2919 1785 SMART serkin_6 525 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2919 1785 SMART serkin_6 1465 1743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2919 1785 CDD STKc_IRAK 1471 1737 - -
Gso8g2919 1785 SUPERFAMILY Protein kinase-like (PK-like) 1450 1765 IPR011009 -
Gso8g2919 1785 SMART ntp_6 351 423 IPR003609 -
Gso8g2919 1785 SMART ntp_6 1288 1360 IPR003609 -
Gso8g2919 1785 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 956 1783 - -
Gso8g2919 1785 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 841 - -
Gso8g2919 1785 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 850 904 - -
Gso8g2919 1785 ProSiteProfiles Protein kinase domain profile. 525 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2919 1785 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 180 IPR036426 -
Gso8g2919 1785 Gene3D - 958 1082 IPR036426 -
Gso8g2919 1785 Gene3D - 23 147 IPR036426 -
Gso8g2919 1785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1586 1598 IPR008271 GO:0004672|GO:0006468
Gso8g2919 1785 SUPERFAMILY Protein kinase-like (PK-like) 853 954 IPR011009 -
Gso8g2919 1785 Pfam Protein tyrosine and serine/threonine kinase 1466 1734 IPR001245 GO:0004672|GO:0006468
Gso8g2919 1785 Pfam Protein tyrosine and serine/threonine kinase 526 792 IPR001245 GO:0004672|GO:0006468
Gso8g2919 1785 Pfam Protein tyrosine and serine/threonine kinase 847 887 IPR001245 GO:0004672|GO:0006468
Gso8g2919 1785 Gene3D Transferase(Phosphotransferase) domain 1 821 957 - -
Gso8g2919 1785 Pfam D-mannose binding lectin 1008 1109 IPR001480 -
Gso8g2919 1785 Pfam D-mannose binding lectin 73 175 IPR001480 -
Gso8g2919 1785 SUPERFAMILY Protein kinase-like (PK-like) 510 834 IPR011009 -
Gso8g2919 1785 ProSiteProfiles Protein kinase domain profile. 1465 1743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2919 1785 ProSiteProfiles Bulb-type lectin domain profile. 962 1081 IPR001480 -
Gso8g2919 1785 ProSiteProfiles PAN/Apple domain profile. 1276 1361 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2919 Gso-Chr8 46794572 46805507 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2919 855 902 Receptor kinase-like Gene Family AT4G05200 66.667 1.29e-11 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso8g2919 PK_Tyr_Ser-Thr 2.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2919 - - gsj:114424251 3573.1