Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2882 ATGGCTGCCAATTTCTGGACATCATCTCATTACAAGCATCTTCTGGATCAGGAAGATGTGGATGTGGTGAATACACTCGACAAGGAAAAGGATATTTTGAAATTGGCTCAACAAGTAAAAGTGAGGCAGAGGGTTGTGGCCACAGCAGTTACATACATGAGGCGTGTTTACACCAGGAAGAGTATGGCTGAATATGATCCACGCTTGGTAGCTCCAACATGCTTGTACCTGGCATCAAAAGCAGAAGAAAGCACAGTGCAGGCTCGGCTTCTTGTATTTTACATTAAAAAATTATACAGTGATGACAAGTATAGATATGAAATCAAGGACATACTTGAAATGGAAATGAAGATTTTAGAAGCTCTTAATTATTACCTGGTTGTATACCATCCATACCGTTCACTATCTCCGTTGCTTCAGGATGCAGGTCTGAATGATCTAAACATGACTCAACTAACTTGGGGGCTTGTAAATGACACATACAAGATGGACCTAATTCTTGTACATCCTCCGCATTTGATTGCTTTAGCTTGCATATACATTGCTAGTGTGCTCAGGGAGAAAGACACCACTGCTTGGTTTGAAGAACTTCGTGTTGATATGAATGTGGTTAAAAACATATCAATGGAGATACTTGATTTTTATGAAAGCAATAGAATGTTCACTGATGAGAGAATCAATGCTGCTCTTCAGAAGCTGAGCCTGAGACCCTAG 714 0.402 MAANFWTSSHYKHLLDQEDVDVVNTLDKEKDILKLAQQVKVRQRVVATAVTYMRRVYTRKSMAEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLYSDDKYRYEIKDILEMEMKILEALNYYLVVYHPYRSLSPLLQDAGLNDLNMTQLTWGLVNDTYKMDLILVHPPHLIALACIYIASVLREKDTTAWFEELRVDMNVVKNISMEILDFYESNRMFTDERINAALQKLSLRP* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2882 237 SUPERFAMILY Cyclin-like 4 128 IPR036915 -
Gso8g2882 237 Pfam Cyclin, N-terminal domain 32 126 IPR006671 -
Gso8g2882 237 PANTHER CYCLIN-C1-2-LIKE ISOFORM X1 4 232 - -
Gso8g2882 237 CDD CYCLIN 32 119 IPR013763 -
Gso8g2882 237 PIRSF Cyclin_C_H_G 1 237 - -
Gso8g2882 237 Gene3D - 128 224 - -
Gso8g2882 237 SMART cyclin_7 30 120 IPR013763 -
Gso8g2882 237 SMART cyclin_7 133 213 IPR013763 -
Gso8g2882 237 CDD CYCLIN 128 197 IPR013763 -
Gso8g2882 237 Gene3D - 31 127 - -
Gso8g2882 237 PANTHER CYCLIN 4 232 IPR043198 GO:0006357|GO:0016538
Gso8g2882 237 SUPERFAMILY Cyclin-like 130 225 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2882 Gso-Chr8 46461668 46470838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2882 44 183 Core Cell Cycle Gene Families AT5G27620 30.000 2.41e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2882 K15161 - gmx:100816019 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1308 18 35345661 35357329 Gso8g2882 8 46461668 46470838 GST