Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2864 ATGTACGGCGGCGACAGCGACAACAGCGACGGCGGCAGCGATGACCGGCGCCGCGGCGACACGCTGGACTTCCGGAACCTGAAGGTGGTTTCCGCCGTGGGGCGCGGCGCGAAGGGAGTGGTGTTTCTGGCGCGGCCGTACGGCGCAGCGGCGGGTGGCGGGGAGTGGGTGGCGCTGAAGGTGGTGTCGAAGGCGCTTCTTAGAAAAAAGAACAAAAACGGCTATGGCGGGTGCAAGAGGGTGTCGTTCGAGAGGCACATACTGCGTCATTTGGATCACCCCCTTTTTCCGCGGTTCCGTGGGGCCTTCGAGACGGAGCAGCTCACGGGGTTCGCCATTGATTATTGCCACGGTGGAAATCTGCATTCTCTCAGGAAGAAGCAACCGGAGAAAACGTTCTCTGAAAAAAGCATAAGGTTTTACGCAGTGGAATTGGTTCTAGCATTGGAGTATTTGCACAACTTTGGAGTAGTGTATAGGGATTTAAAGCCAGAGAACATCATGATCCAAGAAACAGGTCACATAATGCTTGTGGATTTTGATCTCTCGAAGAAGCTAAAGCTAAAGTCAAACTCATCAAGTTGCAACTCGTCACCGAATTCTGACTCGTCATCAGAGAAGGAGAAGAGAAAGCGACAAATATCGCGGTTCAATTGTTTTTGTCACACAGGAATGTCCTTGTACGACTTGGATATTCCAAGTCAACTCGATACGATCCCGACACGTCAAAGCTTATCAGATTTGTTGGAGAAGTCAAACTCATTTGTGGGAACCGAGGATTACGTGGCACCCGAGGTTATTTTAGGTCAAGGACATGACTTTGGAGTTGATTGGTGGTCATTGGGAATTGTTTTGTATGAGATGCTTTATGGGGCGACGCCGTTTAAGGGCGCTAATAGGAAAGAAACGTTTCAACGAATTATAACCAAAGAGCCAGATTTGATGGGTGAAACGACGCCATTGAAGGACTTGATCATCAAGTTGCTTGAGAAAGATCCTAATCGTAGGATTGAGGTTGATGAGATCAAGAGTCATGATTTCTTTAAAGGCGTCAAGTGGGACACGGTGTTGGAAATTGCACGTCCACCATATATTCCTCAAAATGATCATGAAATCGAGGATTTGATAGGATTTTCGAAAAAAGATGTGGAATCTTTTGTTCATGGGATATTTTTCCCCAAGAATAAAAGGGAGAAAGATAAAACAAATGAAGGAGATAAAAATGGGAATACAATTGAAAGTCGAAAAGACGAGGATAATAATCACAATAATAAGAATGTGTGGGTTGACAAGTTGAATCAAGATTCCATTAAGGATGACAATTTTTTAGTTTTTTAA 1338 0.4574 MYGGDSDNSDGGSDDRRRGDTLDFRNLKVVSAVGRGAKGVVFLARPYGAAAGGGEWVALKVVSKALLRKKNKNGYGGCKRVSFERHILRHLDHPLFPRFRGAFETEQLTGFAIDYCHGGNLHSLRKKQPEKTFSEKSIRFYAVELVLALEYLHNFGVVYRDLKPENIMIQETGHIMLVDFDLSKKLKLKSNSSSCNSSPNSDSSSEKEKRKRQISRFNCFCHTGMSLYDLDIPSQLDTIPTRQSLSDLLEKSNSFVGTEDYVAPEVILGQGHDFGVDWWSLGIVLYEMLYGATPFKGANRKETFQRIITKEPDLMGETTPLKDLIIKLLEKDPNRRIEVDEIKSHDFFKGVKWDTVLEIARPPYIPQNDHEIEDLIGFSKKDVESFVHGIFFPKNKREKDKTNEGDKNGNTIESRKDEDNNHNNKNVWVDKLNQDSIKDDNFLVF* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2864 445 Gene3D Transferase(Phosphotransferase) domain 1 120 194 - -
Gso8g2864 445 Gene3D Transferase(Phosphotransferase) domain 1 250 367 - -
Gso8g2864 445 SMART serkin_6 27 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2864 445 Pfam Protein kinase domain 251 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2864 445 Pfam Protein kinase domain 29 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2864 445 ProSiteProfiles Protein kinase domain profile. 27 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g2864 445 MobiDBLite consensus disorder prediction 397 427 - -
Gso8g2864 445 ProSiteProfiles AGC-kinase C-terminal domain profile. 349 445 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gso8g2864 445 MobiDBLite consensus disorder prediction 189 209 - -
Gso8g2864 445 PANTHER SERINE/THREONINE-KINASE OXI1-LIKE PROTEIN 1 431 - -
Gso8g2864 445 MobiDBLite consensus disorder prediction 397 425 - -
Gso8g2864 445 Gene3D Phosphorylase Kinase; domain 1 27 119 - -
Gso8g2864 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Gso8g2864 445 SUPERFAMILY Protein kinase-like (PK-like) 26 380 IPR011009 -
Gso8g2864 445 PANTHER FLIPPASE KINASE 1-RELATED 1 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2864 Gso-Chr8 46315555 46317702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2864 15 445 AGC Kinase Gene Family AT3G25250 51.818 1.17e-141 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso8g2864 Pkinase 9.4e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2864 K20714 - gmx:100813693 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2864 8 46315555 46317702 Gso3g0779 3 28113268 28116443 PCT
Gso3g0779 3 28113268 28116443 Gso8g2864 8 46315555 46317702 PCT