Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2848 ATGAAGTTCAACATCGCGAATCCCACCACTGGATGCCAGAAGAAGCTCGAGATCGACGACGATCTGAAACTGCGAGCATTTTGGGACAAGAGGATCTCACAGGAGGTCATCGGAGATGCACTCGGTGAGGAATTTAAGGGCTATGTCTTCAAAATTACCGGAGGTTGTGACAAACAAGGATTTCCAATGAAGCAGGGAGTGCTGACTCCTGGTCGTGTTAGACTTTTGCTTCACAGGGGAACTCCTTGCTTCCGTGGATATGGAAGGCGTAATGGAGAGCGTAGGAGAAAGTCTGTTCGTGGGTGCATTGTCAGCCCAGACCTCTCTGTTTTGAACTTGGTAATTGTGAAGAAAGGTGAGAATGATTTACCAGGATTGACTGATGTTGAGAAGCCAAGGATGAGAGGCCCAAAGAGAGCATCCAAAATCCGTAAACTGTTCAACCTGTCTAAGGAGGATGATGTTAGGAAGTATGTCAACACCTACCGTCGTACATTTACGACAAAAGCTGGGAAAAAGGTGAGCAAAGCTCCCAAGATACAAAGACTGGTCACTCCTCTTACGCTCCAAAGAAAGCGGGCAAGAATTGCTGATAAGAAGAAGAGGATTGCCAAGGCAAAATCTGAGGCAGCAGAGTACCAGAAACTCCTTGCCTCCAGGTTGAAGGAGCAGAGAGACCGCCGCAGTGAGAGTTTGGCCAAGAGGAGATCCAAGCTTTCCAGTGCTGCTAAGGCAGCTGTATAA 744 0.4785 MKFNIANPTTGCQKKLEIDDDLKLRAFWDKRISQEVIGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKAGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRDRRSESLAKRRSKLSSAAKAAV* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2848 247 MobiDBLite consensus disorder prediction 218 247 - -
Gso8g2848 247 PANTHER 40S RIBOSOMAL PROTEIN S6 1 246 - -
Gso8g2848 247 MobiDBLite consensus disorder prediction 218 237 - -
Gso8g2848 247 Gene3D - 133 234 - -
Gso8g2848 247 Coils Coil 189 216 - -
Gso8g2848 247 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Gso8g2848 247 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Gso8g2848 247 PIRSF RPS6e 1 247 IPR014401 GO:0003735|GO:0005840|GO:0006412
Gso8g2848 247 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Gso8g2848 247 PANTHER 40S RIBOSOMAL PROTEIN S6 1 246 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2848 Gso-Chr8 46158335 46161297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2848 1 242 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 73.140 1.05e-118 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2848 K02991 - gmx:100804076 413.305