Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2840 ATGGCGGGACTGCCCAGATGCCTAGTCAGCATGTCCCGCCACGCCAGTTTGAATGGCGGTATGGACCCTGTCCCGCTGATGCCAATGGCGGCATCCATGGTTTTGCACCCTCCGCTGTTTCACATGGATTCAGACAACGGAAATGAAGCAGAACATAGCTGTCTAGAAGAGAGTACAAGTATATTTGAAGGAGTTGAAGTTCAAGAACCATATGTGGGCATGGAATTTGATTCTGAAGAAGATGCTAGGGAGTTTTATGTTGATTATGCCAGACGGATAGGATTTGTTGTACGCATAATGCAACGGCGACGTTTTGGAATTGATGGGAGGACTCTTGCTCGCCGACTTGGATGTAACAAACAAGGATTCTCACCAAATAACATGGGAATATTAGGACCAGAAAAAAAGCTAAGACCTAGCGCCCGAGAAGGTTGCAAGGCAACAATTTTGGTGAAGTTGGAAAAATCAGGAAAATGGGTTGTCACAAGATTTGTAAAGGATCACAACCATCCTCTAATTGCTACAGCTAATGGGTTCAGCACAGCGGTGAGTTTTCTGCTTGTTTAA 567 0.4533 MAGLPRCLVSMSRHASLNGGMDPVPLMPMAASMVLHPPLFHMDSDNGNEAEHSCLEESTSIFEGVEVQEPYVGMEFDSEEDAREFYVDYARRIGFVVRIMQRRRFGIDGRTLARRLGCNKQGFSPNNMGILGPEKKLRPSAREGCKATILVKLEKSGKWVVTRFVKDHNHPLIATANGFSTAVSFLLV* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2840 188 Pfam FAR1 DNA-binding domain 84 173 IPR004330 -
Gso8g2840 188 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 49 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2840 Gso-Chr8 46092516 46096172 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gso8g2840 FAR1 4.9e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2840 - - gsj:114424316 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2840 8 46092516 46096172 Gso3g0806 3 28876953 28880063 PCT
Gso3g0806 3 28876953 28880063 Gso8g2840 8 46092516 46096172 PCT