Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2818 ATGCATCAGAAGAAATCAGAGGTTCAGATCGGAAAAGAAAGCGTAGGCGTCTCTTCCGATTTCAATCCGCAATTCCAAAAACACCCCTACCACCGCCACCAGCAATTCTACCCCCAAATCGAAATCGATATATCTCCCCAATCCCCACCGCAGCCAACCACACCTCCTCCTCCTCCTCCTCCCCCTTCACTCTCCAAACAGAAACACATCTTCAAGCCCCAGAACGCCGCCTTCTTCTCCGTATCCGTCGCCGCTAAGAGCGCCGCGTTCCGCGCGCTGCGGCGCGTGAGGCGCCAGCGCGCGTTGCTCCTACTCGCGGTCCCCTTCCTCTACCTCTACTTCCTCATCTCGCGCTCCTTCCTCCTCGACCTCCTCTCCGCCATCGCCTTCTCCGCCGCGCTCGTGTTTTCTCTTAACCTCGCTTTCCCTTTGCCTCTCCGTTCGGTTCGCCTCAAGGCGGCGAAGAATTCCGCCTCCCGTCCCGCGCCCGCTCTTCCGGTGTTCTGGACGATCGGGTCGAGGCCGAAGACGGAGAAGCGCGCCGCGGCGTCCGGGTGCTGGGTGCAGGTGTTTGGAAACGGCGACGTTTACGAGGGGGAGTTTCATCGGGGGAAGTGTTCGGGGAGCGGGGTGTATTACTATAGCAGGAGTGGGAGGTACGAGGGGGATTGGGTGGACGGGAAGTACGATGGGTATGGGGTGGAGACGTGGGCGCGTGGGAGCCGCTACCGTGGGTGTTACTGGCAGGGGCTGAGGCACGGGTTTGGGGTCTATAGGTTTTACACCGGGGATGTCTATGCTGGAGAGTGGTCTAATGGGCAGAGCCATGGGTCTGGGGTTCACACTTGCGAGGATGGGAGTCGCTATGTTGGGGAGTTTAAGTGGGGGGTCAAGCATGGCCTTGGCCATTACCATTTCAGAAATGGAGATACATACGCGGGTGAATACTTTGCAGACAAGATGCATGGTTTTGGCATATATCATTTTGCGAATGGCCATCGTTATGAAGGAGCCTGGCATGAAGGCAGAAGGCAAGGACTTGGAATGTATACATTTAGAAATGGTGAAACCCAATCTGGTCACTGGCAAAATGGAGTCCTTGACATTCCAAGCACACGGAACACCACTTCTCCAGTTTCTCCTGTTGGTGTCTATTATTCCAAAGTACTCAATGCAGTGCAGGAAGCAAGACGAGCTGCCGAGAAAGCCTATGATATGGCTAAGGTAGATGAAGGGGTGAACAGAGCTGTAGCAGCTTCTAATAGAGCAGCCAATGCAGCTAGAGTAGCTGCTGTAAAAGCTGTACAAAAACAGAATTATCATGTTAGCAGTGAAAGCTTCTCAATTCCTGTTGTGTAA 1359 0.5453 MHQKKSEVQIGKESVGVSSDFNPQFQKHPYHRHQQFYPQIEIDISPQSPPQPTTPPPPPPPPSLSKQKHIFKPQNAAFFSVSVAAKSAAFRALRRVRRQRALLLLAVPFLYLYFLISRSFLLDLLSAIAFSAALVFSLNLAFPLPLRSVRLKAAKNSASRPAPALPVFWTIGSRPKTEKRAAASGCWVQVFGNGDVYEGEFHRGKCSGSGVYYYSRSGRYEGDWVDGKYDGYGVETWARGSRYRGCYWQGLRHGFGVYRFYTGDVYAGEWSNGQSHGSGVHTCEDGSRYVGEFKWGVKHGLGHYHFRNGDTYAGEYFADKMHGFGIYHFANGHRYEGAWHEGRRQGLGMYTFRNGETQSGHWQNGVLDIPSTRNTTSPVSPVGVYYSKVLNAVQEARRAAEKAYDMAKVDEGVNRAVAASNRAANAARVAAVKAVQKQNYHVSSESFSIPVV* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2818 452 Pfam MORN repeat 289 311 IPR003409 -
Gso8g2818 452 Pfam MORN repeat 266 288 IPR003409 -
Gso8g2818 452 Pfam MORN repeat 220 242 IPR003409 -
Gso8g2818 452 Pfam MORN repeat 312 334 IPR003409 -
Gso8g2818 452 Pfam MORN repeat 197 215 IPR003409 -
Gso8g2818 452 Pfam MORN repeat 335 356 IPR003409 -
Gso8g2818 452 Pfam MORN repeat 243 265 IPR003409 -
Gso8g2818 452 Gene3D - 272 317 - -
Gso8g2818 452 Gene3D - 227 271 - -
Gso8g2818 452 Gene3D - 179 226 - -
Gso8g2818 452 Gene3D - 318 382 - -
Gso8g2818 452 MobiDBLite consensus disorder prediction 1 26 - -
Gso8g2818 452 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 73 443 - -
Gso8g2818 452 MobiDBLite consensus disorder prediction 41 67 - -
Gso8g2818 452 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 237 365 - -
Gso8g2818 452 MobiDBLite consensus disorder prediction 48 66 - -
Gso8g2818 452 MobiDBLite consensus disorder prediction 12 26 - -
Gso8g2818 452 PANTHER - 73 443 - -
Gso8g2818 452 SMART morn 218 239 IPR003409 -
Gso8g2818 452 SMART morn 287 308 IPR003409 -
Gso8g2818 452 SMART morn 264 285 IPR003409 -
Gso8g2818 452 SMART morn 195 216 IPR003409 -
Gso8g2818 452 SMART morn 333 354 IPR003409 -
Gso8g2818 452 SMART morn 310 331 IPR003409 -
Gso8g2818 452 SMART morn 241 262 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2818 Gso-Chr8 45906961 45911291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2818 189 368 Acyl Lipid Metabolism Gene Families AT1G60890 36.667 1.98e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2818 - - gmx:102667330 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2818 8 45906961 45911291 Gso1g1153 1 46563393 46566564 PCT
Gso3g0908 3 32543307 32549505 Gso8g2818 8 45906961 45911291 PCT