Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2815 ATGTCCTTCAATCAATCAAAGTCCGATAAGAGCGACGCTGTGTACCGAAAATCCGGGCGACCCGGCAGCTTCAATCAGCAGCGCGGTCCCTCCGGCGGTGCGTACGGCAAGGGCGGCGGTGGCGGCGCCGGGCCTTCTCCGTCGCTCTCCTCTAACCGGAGTTTTAACAAGAAGTCTAATAATAATGCACAAGGTGGGCAATCTAGGGTAAACCCTACTCCGGTGAATTCGACTGAGTCTAATAGTACTTATGCAGCCCGGACTGTACCAAACGGTTCCCATGTACAGCCACATATTCATGGAGGATCTGATGCACCGATTACAAATGCAACTGCCAAGCCATCTGAATCGTTGGCTGCACAGAGGAGCACCAGAACTGTTCCAAAAGCTCCTACTTCTCAACCTCCCGCCATGAGTTCTTATCCAGCAGCTCCTACAACCCCAGCTAAGGCAGATGCATCTAAGGCATTCCCTTTCCAATTTGGATCTATTAGTCCTGGCTTTATGAATGGGATGGCAATTCCTGCTCGCACAAGCTCAGCTCCTCCTAATATAGATGAGCAGAGGCGTGAGCAAGCTCGACATGATTCTTTTAGACCCGCACCCTCAATGCCAACACCTCCAGTTCCAAAGCAGCAGGCAGTGAAGAAGGATACAAGTGTTGCTGACCAATCTAACACTGGGGAGACTTATACTGGGACTAGGGCCAAAAAGGATACTCAAGTGTCACCATTACCCCCAGCAAGCCAGATGCAGAAGCCTTCTGTCATTTCTTTATCTGGAATGTCAATGCCAATGCCATATCACCAGTCACAGGCATCTGTACACTTTGGTGGTCCTAATCCACAGATTCAGTCTCAAGGTATGTCATCGGCACCTCTTCAGATGCCATTACCAATGCCTTTACCGATTGGAAGTGCTGCACAAGTGCAACAACAGGTTTTTGTTCCAGGCCTTCAACCTCATCCTATCCATCCTCAGGGAATCATGCATCAGGGCCAAAGCATGGGTTTCAATCCTCAAATTGGCCCTCAGTTGCCCCATCAGTTAGGCAACATGGGTATTGGAATTAGCCCACAATATCCACCACAGCAAGGAGGAAAATTTGCTGCTCCTCGTAAAACTACTCCTGTCAAGATAACTCACCCTGAGACACATGAAGAGCTAAGACTTGATAAAAGGACAGATGCATATTCAGATGGTGGGTCATCTGGTGCAAGGCCTCATTCTGGCATGCCTTCTCAATCTCAGCCTGCCCAGCAATTCGCAGCTTCCCATCCCATTAATTACTATCCATCCAGTTCCTACAGTACCAATCCTCTCTTTTATCCAACTCCCAGTTCTCTTCCATTAACAAGTAGCCAGATAACTCCTAACTCTCAGCCACCCAGATTTAATTATGCAGTGAACCATGGCCCGCAAAATGTTAGTTTTGTAAATTCATCATCTCATAGTTCCCTGCCTGTTAATAAAGCTGGCACTTCTATTCCTGGCAATGCTGAACCGCCTAATCCAGAATTTTCCTGGGATGTGCATAATACATTCTTGTCAGCTCCTTCAGGAGTAACTTCTGTGTCTATTAAGCCAAGTGGTGGATCTGGTGTTGTGGACTCATCATTTTCCAATTCCAGTACTCAAAAGAGTGGATCTCCTAGTTCTTCATTGACATCTGGTGATGCTTTCTCTTCTGTGCCACTAAAAGGGTCTGAAACAACTGAAATCTCTTCACAACAGTCTAAGGTGTCCAGTGATTCATCAGCTTTGAACTCATTGCCAAATCTGTCTGCTGCATGTACTGTGAAGCCTACATCAGCTTCCTTGTTACTTCCTACATCTGCTGTGAGTGAAGAGTCTGTTTCAGTTCTGCCTAATAATGAGGGCAGAAAGAAGGAATCTCTTAGTAGGTCAAATTCTTTGAAGGATAACCAGAAGAAAATACACAAGAAAGGCCAATCACAGCATCAGGTTGCTGTGCAATCTCCTTCTGTGGCTAATGTGCCTTCCCAAGCTGTTGATGGTGATATCCCTGTTGGTGAAGTTTCTGAAACTGTAGGAACTAAAACAAACCATTCTGCGGCAGTTACCAGTGAAGATCTCTCCGCTGCAGCTTCAGACATGTTATCAGCTACCAGTGAGAGCATAACTTCTGCTGTTGAAACGAAAACTAATGATTCTACACAAGTTTCTGCATGTGCTTCAGCTGAAGGACCCGTTACACTAGTGGCGGATAATTTGAACAATCATAAGAATGCTGAGATAGATGAATTGTTACAACAGGATAAACCGTTACAGCCAGATATTTTGGAAATGGTTCGTAAAACAGAAAATTTGTCTCTTCAAGGAAGTAAACAAAGTGTTAGTGATGGTGGAACAGAATTAAAACAACCCAAGCAAGGTGCTGCAAAGTTAAGCACTGAGGCTGTAACCTTGAGGACCGTGCAGCAAGGGCAAGGGCAGGACGAGTCTACCAGTTGTAGTGCAGAATGTGACAGGACGGCTGATGATAAGGGCATATCTATCTCTACCACTTTGGATTCCAAAGATGTTTGTTTAAATAGAAATGATAGTGTAGTTAGTAATGAAGCTGTTTCTTCAAATTCTGGCACATCAGATCAGCAGTCTGCTGATCTCCTAGAAACAACTTCAAAACAGTGCAAGGATGATAGTGCAGAGAATGCTGGCAGTGGTTCAGTGTCTCTTCCAGCATCAGGTACCAAGGACAAACCAATTTCAGAGTCTAGTAAGGTGAAACCTACATCAAAGGGGAAAAAGAAACGAAAAGAGATTCTTCAGAAGGCCGATGCTGCCGGGTCAACATCTGATCTTTATAATGCATACAAGGGACCTGAAGAAAAGAAAGAAACTGTTTTAAGTTCAGAGAAAACAGAATGTGGTTCCACTTCTGAAAATTTAGAGCAGTTGCCAACTGATACTGCTCAGCCAGATGCTGTAGCTGAGCAATCTAAGCAGAGTAAAGCTGAACTTGATGATTGGGAGGATGCTGCTGACATGTCTACACCAAAACTAGAAGTTTCTGATGAAACCGGACAGGTTAGTGATGGAAGTGCAATTACTGCCAAAAAGTACTCTCGAGATTTCCTTTTGAAATTTGCAGAGCAGTGCACTGATCTTCCTGGAGGGTTTGAAATCACGGCAGACATAGCTGAGGCTTTGATGGGTGCTAATGTTAGTTCTCATGTAATTGAACATTCTTCTACTGGAAGAATTATTGATAGGTCAGGTGGGATGTCTCGTCGTGGGAGTGGTGTTATTGAGGAAGACAAATGGAATAAAGTTTCTAATGCATTTCATTCCGGTATGCGATTGGATGGTGTTGGAGGTAATGCAGGATTTCGACCTGGCCAAGGAGGCAATTTTGGTGTTTTAAGGAATCCACGCACACAGACACCTCTGCAGTATGCTGGTGGGATTCTTTCTGGTCCAATGCAATCCATGGTAAATCAGGGAGGAATGCAAAGAAATAGCCCTGATGGAGAAAGGTGGCAGCGCACTAATAGCTTCCAGCAGAGGGGTTTAATTCCATCTCCGTCTACTCCTCAAACTCCTTTACAGATGATGCACAAAGCTGAAAAGAAATATGAGGTGGGTAAAGTGACAGATGAGGAACAGGCAAAGCAGAGGCAATTGAAGGGTATATTAAACAAGTTAACTCCTCAGAATTTTGAGAAGCTTTTTGATCAGGTTAGAGCAGTTAATATTGACAACGTGGTCACTCTCAATGGTGTCATCTCGCAAATCTTTGAGAAGGCCTTGATGGAGCCTACCTTCTGTGAAATGTATGCCAATTTCTGTTTTCATCTGGCAGCTGTGTTACCTGATCTCAGTCAAGATAATGAAAAGATAACTTTCAAGAGATTATTGTTAAACAAGTGCCAGGAAGAATTTGAGAGGGGGGAAAGAGAGCAAGAAGAAGCTAATAAGGCTGATGAGGGTGAGGTCAAGCTGTCTAATGAGGAAAGAGAAGAGAAACGAACCAAGGCAAGAAGACGTATGTTGGGGAATATCAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAAAGGATAATGCATGAATGCATCAAGAAGTTATTGGGTCAGTATCAGGATCCAGATGAAGAAGATATTGAAGCTTTGTGCAAGCTGATGAGTACTATTGGGGAGATGATTGACCATCCCAAAGCCAAGGAACATATGGATGCATATTTTGAAATGATGAGATCATTATCAAACAACATGAATTTATCTTCTAGGTTGAGGTTCATGTTGAAGGATGTCATTGATTTGAGAAAGAATAAATGGCAACAAAGAAGAAAGGTTGAAGGTCCGAAGAAGATTGAGGAGGTGCACAGAGATGCTTCTCAAGAGAGGCTGGCCCAAGCTAGTAGGCTGGGTCGTGGTCCAGGCAACAATCCACCTCGAAGAATCCCTATGGATTTTGGTCCAAGAGGATCATCAATGTTATCTCCTAATGCTCAGATGGGTGGACTGCGTGGATTGCCTACTCAAGTTCGCGGGTACGGTTCTCAGGATGCTCGCATGGAAGACAGGCAAACTTATGAGGCTAGGACATTGTCAGTTCCCTTGCCTCAAAGACCTTTGGGTGATGAATCAATAACCTTGGGACCAATGGGTGGCCTTGCCAGAGGAATGTCCATTAGAGGTCCACCTGCAGTTTCAAGTTCAACTGGTCTTAGTAATGGTTATAATAATTTGTCAGAGCGCACTTCATACAGCTCTAGGGAGGACCCTGCATCAAGATATACTCCAGATAGATTTGCTGGTTCGACTGCTTACGATCAATCTATTGTTCAAGATCGTAATATGAATTATGGTAACAGGGACTTGAGAAATGCAAATAGGATTCTTGATAAACCTGTTGTAACTTCACCTCCTGCCCGAACACAAGGGACAGCAGCCTCCCTGAGTATTTCTCCAGAGCGACTGCAGGACATGTCCATGGCAGCAATCAGAGAATACTATAGTGCTAGAGATGTGAATGAAGTTGTTCTATGCATCAAAGATCTGAACTCCCCAGGCTTTCATCCTTCCATGGTTTCTCTCTGGGTCACAGACTCATTTGAGAGAAAGGACAACGAGAGAGATCTTTTGGCCCAGCTGCTTGTCAAGGTTGTGAAATCTCAGGATGGACCCTTGGGTCAAGCCCAGCTCATCAAAGGGTTTGAATCTGTTCTCAGTACTTTGGAAGACGCGGTTAACGATGCCCCCAAAGCACCAGAGTTTCTTGGCCGTGTTTTTGCCAAAGCTATAACAGAGCATGTAGTCTCTTTGAAAGAGATTGGGCGGTTAATACATGAGGGTGGAGAGGAACCGGGGAGCCTCTTAGAAGCTGGACTTGCAGCTGATGTTCTTGGAAGCACATTGGAGGTAATAAAAATGGAAAAGGGTGATGCTGTTTTGAGTGAGATCTGCACGAGCTCCAACTTGCGGTTGGAGACCTTCCGGCCACCCGAACCTCTTAAATCAAGGAAGTTAGAGAAATTTATTTAG 5517 0.4454 MSFNQSKSDKSDAVYRKSGRPGSFNQQRGPSGGAYGKGGGGGAGPSPSLSSNRSFNKKSNNNAQGGQSRVNPTPVNSTESNSTYAARTVPNGSHVQPHIHGGSDAPITNATAKPSESLAAQRSTRTVPKAPTSQPPAMSSYPAAPTTPAKADASKAFPFQFGSISPGFMNGMAIPARTSSAPPNIDEQRREQARHDSFRPAPSMPTPPVPKQQAVKKDTSVADQSNTGETYTGTRAKKDTQVSPLPPASQMQKPSVISLSGMSMPMPYHQSQASVHFGGPNPQIQSQGMSSAPLQMPLPMPLPIGSAAQVQQQVFVPGLQPHPIHPQGIMHQGQSMGFNPQIGPQLPHQLGNMGIGISPQYPPQQGGKFAAPRKTTPVKITHPETHEELRLDKRTDAYSDGGSSGARPHSGMPSQSQPAQQFAASHPINYYPSSSYSTNPLFYPTPSSLPLTSSQITPNSQPPRFNYAVNHGPQNVSFVNSSSHSSLPVNKAGTSIPGNAEPPNPEFSWDVHNTFLSAPSGVTSVSIKPSGGSGVVDSSFSNSSTQKSGSPSSSLTSGDAFSSVPLKGSETTEISSQQSKVSSDSSALNSLPNLSAACTVKPTSASLLLPTSAVSEESVSVLPNNEGRKKESLSRSNSLKDNQKKIHKKGQSQHQVAVQSPSVANVPSQAVDGDIPVGEVSETVGTKTNHSAAVTSEDLSAAASDMLSATSESITSAVETKTNDSTQVSACASAEGPVTLVADNLNNHKNAEIDELLQQDKPLQPDILEMVRKTENLSLQGSKQSVSDGGTELKQPKQGAAKLSTEAVTLRTVQQGQGQDESTSCSAECDRTADDKGISISTTLDSKDVCLNRNDSVVSNEAVSSNSGTSDQQSADLLETTSKQCKDDSAENAGSGSVSLPASGTKDKPISESSKVKPTSKGKKKRKEILQKADAAGSTSDLYNAYKGPEEKKETVLSSEKTECGSTSENLEQLPTDTAQPDAVAEQSKQSKAELDDWEDAADMSTPKLEVSDETGQVSDGSAITAKKYSRDFLLKFAEQCTDLPGGFEITADIAEALMGANVSSHVIEHSSTGRIIDRSGGMSRRGSGVIEEDKWNKVSNAFHSGMRLDGVGGNAGFRPGQGGNFGVLRNPRTQTPLQYAGGILSGPMQSMVNQGGMQRNSPDGERWQRTNSFQQRGLIPSPSTPQTPLQMMHKAEKKYEVGKVTDEEQAKQRQLKGILNKLTPQNFEKLFDQVRAVNIDNVVTLNGVISQIFEKALMEPTFCEMYANFCFHLAAVLPDLSQDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKLSNEEREEKRTKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFEMMRSLSNNMNLSSRLRFMLKDVIDLRKNKWQQRRKVEGPKKIEEVHRDASQERLAQASRLGRGPGNNPPRRIPMDFGPRGSSMLSPNAQMGGLRGLPTQVRGYGSQDARMEDRQTYEARTLSVPLPQRPLGDESITLGPMGGLARGMSIRGPPAVSSSTGLSNGYNNLSERTSYSSREDPASRYTPDRFAGSTAYDQSIVQDRNMNYGNRDLRNANRILDKPVVTSPPARTQGTAASLSISPERLQDMSMAAIREYYSARDVNEVVLCIKDLNSPGFHPSMVSLWVTDSFERKDNERDLLAQLLVKVVKSQDGPLGQAQLIKGFESVLSTLEDAVNDAPKAPEFLGRVFAKAITEHVVSLKEIGRLIHEGGEEPGSLLEAGLAADVLGSTLEVIKMEKGDAVLSEICTSSNLRLETFRPPEPLKSRKLEKFI* 1839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2815 1838 MobiDBLite consensus disorder prediction 1440 1459 - -
Gso8g2815 1838 SUPERFAMILY ARM repeat 1207 1437 IPR016024 -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 1305 1332 - -
Gso8g2815 1838 Gene3D - 1213 1448 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 613 674 - -
Gso8g2815 1838 Pfam MIF4G domain 1213 1435 IPR003890 GO:0003723|GO:0005515
Gso8g2815 1838 SMART ma3_7 1651 1765 IPR003891 -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 1 151 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 382 423 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 859 880 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 168 254 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 217 254 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 859 1016 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 805 826 - -
Gso8g2815 1838 ProSiteProfiles MI domain profile. 1650 1774 IPR003891 -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 526 588 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 887 909 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 1440 1481 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 408 423 - -
Gso8g2815 1838 Gene3D - 1643 1838 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 989 1007 - -
Gso8g2815 1838 SUPERFAMILY ARM repeat 1646 1833 IPR016024 -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 477 508 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 960 987 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 477 493 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 613 627 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 45 90 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 382 397 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 778 831 - -
Gso8g2815 1838 SMART if4_15 1213 1435 IPR003890 GO:0003723|GO:0005515
Gso8g2815 1838 Pfam MA3 domain 1657 1763 IPR003891 -
Gso8g2815 1838 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 122 1828 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 1558 1586 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 1552 1596 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 628 648 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 108 140 - -
Gso8g2815 1838 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 122 1828 IPR045208 GO:0003743
Gso8g2815 1838 Coils Coil 1295 1315 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 652 667 - -
Gso8g2815 1838 MobiDBLite consensus disorder prediction 778 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2815 Gso-Chr8 45884729 45894598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2815 1 1837 Eukaryotic Initiation Factors Gene Family AT3G60240 44.860 0.0 1294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2815 K03260 - gmx:100796636 3370.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0902 3 32402398 32411260 Gso8g2815 8 45884729 45894598 PCT