Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2808 ATGGCAGGAGGGAGGTATTGTGAGAAGGAAGTGCTTCCATTCACCGCAATGGTTGCTGTTGAGTGCACCAACGTTGGTGTCAACGTTCTATTCAAAGCAGCAACTGAGAAGGGTTTAAGTTACTATGCCTTCATCGCTTATTCATTTGCAGTCTCCACCCTTTTCCTCCTTTTGCCTCTGCCCTTCGTCTTTCGATGGTCAAGGGGGCTTCCTCCACTCAATCTGTCTCTCATCTTCAGAATTTTCCTCCTTGGAGTAATTGGACTTACAGCGCAGCTTTGTGGATATAAAGGACTTAAATACACTTCGCCCACTCTTGCTTCTGCTCTTAGCAACCTTATACCGGCTTTCACCTTCATACTAGCAATCATTTTCAGAATGGAAAAGGTGGCTTTGAGAAGCCCAAGCACTATGGCCAAAATCTTGGGTTCGTTAGTATCCATATCAGGTGCACTCATAGTTGTTCTTTATAAAGGCCCCATAATCTTATCAACTTCTTCTCCACAACCTTCACCAACAACTGATTCTCCAATGGATTCTACATCTCAAACAAACTGGGTTCTTGGTGGATCTCTACTTGCCATTGAGTTTCTTTTGGTTCCAATCTGGTACATTGTTCAGGGTTTCTTTTCCACGGGCCTAAGTAGTTTGGTTCACACATGGGGCCTCCATCTTAAAGGCCCAGTTTATATATCAATCTTTAAGCCTTTGTCGATAGTCGTTGCTGCTGCTTTGAGTGTTATATTCCTCGGTGATGCATTATATTTTGGAACCGTTGTTGGAGCAGTGATACTCTCATTTGGGTTTTATGCTGTCTTATGGGGGAAAGCAAAAGAAGAAGAATTGACTGTAGTGGACTTTGATGATATACGTCCTCCTTCAAATACTAAGAGTCCTTTGTTGCAGAGCTACAAAGTGAAAGATGAAGATAACCAAAATATTTAA 945 0.4233 MAGGRYCEKEVLPFTAMVAVECTNVGVNVLFKAATEKGLSYYAFIAYSFAVSTLFLLLPLPFVFRWSRGLPPLNLSLIFRIFLLGVIGLTAQLCGYKGLKYTSPTLASALSNLIPAFTFILAIIFRMEKVALRSPSTMAKILGSLVSISGALIVVLYKGPIILSTSSPQPSPTTDSPMDSTSQTNWVLGGSLLAIEFLLVPIWYIVQGFFSTGLSSLVHTWGLHLKGPVYISIFKPLSIVVAAALSVIFLGDALYFGTVVGAVILSFGFYAVLWGKAKEEELTVVDFDDIRPPSNTKSPLLQSYKVKDEDNQNI* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2808 314 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 158 - -
Gso8g2808 314 Pfam EamA-like transporter family 26 155 IPR000620 GO:0016020|GO:0016021
Gso8g2808 314 PANTHER WAT1-RELATED PROTEIN 11 206 IPR030184 GO:0016021|GO:0022857
Gso8g2808 314 PANTHER WAT1-RELATED PROTEIN 208 282 IPR030184 GO:0016021|GO:0022857
Gso8g2808 314 SUPERFAMILY Multidrug resistance efflux transporter EmrE 198 278 - -
Gso8g2808 314 PANTHER WAT1-RELATED PROTEIN 11 206 - -
Gso8g2808 314 PANTHER WAT1-RELATED PROTEIN 208 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2808 Gso-Chr8 45817424 45821281 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2808 2 311 Nodulin-like Gene Family AT5G40230 46.486 2.26e-103 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2808 - - gmx:100805667 548.51