Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2787 ATGGCGCCAACGCTGAACCTCTCCGCCGTCGGAATTCCTCTCCGTTTCTCCTCCTCCTTCGACCGCTCCGCCAGCTTTCCCCGGCGGAACTCCGTCCGCGCCGTCGCGGAGGAGGCGGTGGAGACAGGGCGGCCGGCAGCCAGCCTCTACGATGTGTTGCGAGTCGAGCGAGACGCATCTCCGACGGAGATCAAGTCGGCGTACCGGAGCCTCGCGAAGCTCTTACATCCCGACGCGGCGGTGCGGCGTTCGCCAGAGACAGACGGAGGCGGCGGTTACGTCGACGGAGACTTCATTCAGCTCCGAAACGCGTACGAGACGCTGTCGGATCCGTCGGCGAAGGCGATATACGATATGACGCTGGCGGCGCCGCACGGCGGAAGACACCGCCGGTTTTCTACTCCGCTTATTCGGAACCACTCGTCGGCGTTTTACACAACGCGAAGGTGGGAAACAGACCAATGCTGGTAG 471 0.6369 MAPTLNLSAVGIPLRFSSSFDRSASFPRRNSVRAVAEEAVETGRPAASLYDVLRVERDASPTEIKSAYRSLAKLLHPDAAVRRSPETDGGGGYVDGDFIQLRNAYETLSDPSAKAIYDMTLAAPHGGRHRRFSTPLIRNHSSAFYTTRRWETDQCW* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2787 156 SUPERFAMILY Chaperone J-domain 48 127 IPR036869 -
Gso8g2787 156 SMART dnaj_3 47 113 IPR001623 -
Gso8g2787 156 Pfam DnaJ domain 49 118 IPR001623 -
Gso8g2787 156 PRINTS DnaJ domain signature 50 68 IPR001623 -
Gso8g2787 156 PRINTS DnaJ domain signature 68 83 IPR001623 -
Gso8g2787 156 PRINTS DnaJ domain signature 93 113 IPR001623 -
Gso8g2787 156 Gene3D DnaJ domain 34 134 IPR036869 -
Gso8g2787 156 ProSiteProfiles dnaJ domain profile. 48 121 IPR001623 -
Gso8g2787 156 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 156 - -
Gso8g2787 156 ProSitePatterns Nt-dnaJ domain signature. 98 117 IPR018253 -
Gso8g2787 156 CDD DnaJ 50 110 IPR001623 -
Gso8g2787 156 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2787 Gso-Chr8 45625894 45627241 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2787 50 118 C2H2 Transcription Factor Family AT1G74250 39.130 9.10e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2787 - - gmx:100798752 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2787 8 45625894 45627241 Gso8g2787 8 45625894 45627241 ECH
Gso18g0616 18 6743827 6744668 Gso8g2787 8 45625894 45627241 GST
Gso8g2787 8 45625894 45627241 Gso14g0095 14 851140 852003 PCT
Gso14g0095 14 851140 852003 Gso8g2787 8 45625894 45627241 PCT