Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2786 ATGGAGACTCCAATTGAAGTGAAACCTACTCGTGTTGCATCCGGATTCTTAGATGATTTGTCTGAGACTTGCAAGATGGGTAGTCCGAATGGAAGAGCAATGTATAGGACAGACGATGAAGTTCCTTTTGACTCCGAAATAAATTTTCACCCGTCAGAATCGAGTCTGATGGATGTACATGGATCACATTCTGGAGAATCTCGGACTGTCCATCATGAAACGTTGGCGGGTATGATTTACAGGAGCATACAAGTTGTAGTCTTTTCTAACAAACTCAACTTGCTTATGCCTTTTGGGCCTCTTGCAATTCTTGTACAGAAGTTGACTGGTCATCTTGGTTGGGTCTTTGGTCTGAGTTTGTTGGGGATAATGCCTCTGGCGGAGCGGTTAGGTTATGCTACCGAGCAGCTGGCGTTTTACACTGGAGATACTGTTGGGGGTCTTTTAAATGCTACATTTGGAAATGCAACAGAACTGATCATCTCAATATATGCACTGAAAAGTGGAATGACACGCGTTGTCCAGCTCTCTTTGCTGGGTTCAATTTTGTCCAATATGTTACTGGTGCTTGGGTGTGCATTCTTATGTAGCGGGATTGTTAATCACGAGAAGGAGCAAGTGTTTAACAAGGCAGCTGCTTCCGTGAACTCAGGATTATTGCTAATGGCAGTCATGGGCATACTTTTTCCTGCTGTTCTACACTACACTCACACTGAGGTCCATGTTGGGAAGTCAGAGTTGTCACTTTCAAGATTCAGCAGCAGCATTATGCTTGTGGCTTATGTTGCATACCTATTTTTTCAGTTAAAAAGTCAAAGAAATCTCTACGTCTCTGTGAACGAGGATGAGGGTCAGAATGGAAACAACTCAAATGATGATGAATCTTCAGATATTTCTAAATGGGAAACAATAATCTGGCTTTCGGTTATGACTGCTTGGATATCAATCCTGTCAGAATATTTGGTTGGCGCTATAGAGGGAGCATCTACGGCATGGGAAATTCCAGTAGCATTTATTAGTGTCATATTGCTTCCACTAGTGGGGAATGCAGCTGAACATGCCAGTGCTATAATGTTTGCCATGAAAGATAAACTTGACATTTCCTTAGGAGTAGCAATTGGGTCATCCACACAGATATCTATGTTTGTGGAAGGAACTGCTAATTACTTCAAAGGACTAATGCTTATTCTTTGCTATCTGATAGTGGCAGCCAGTTTTTATGTACATGTAGATTCCTCTCAATAA 1245 0.4185 METPIEVKPTRVASGFLDDLSETCKMGSPNGRAMYRTDDEVPFDSEINFHPSESSLMDVHGSHSGESRTVHHETLAGMIYRSIQVVVFSNKLNLLMPFGPLAILVQKLTGHLGWVFGLSLLGIMPLAERLGYATEQLAFYTGDTVGGLLNATFGNATELIISIYALKSGMTRVVQLSLLGSILSNMLLVLGCAFLCSGIVNHEKEQVFNKAAASVNSGLLLMAVMGILFPAVLHYTHTEVHVGKSELSLSRFSSSIMLVAYVAYLFFQLKSQRNLYVSVNEDEGQNGNNSNDDESSDISKWETIIWLSVMTAWISILSEYLVGAIEGASTAWEIPVAFISVILLPLVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFVEGTANYFKGLMLILCYLIVAASFYVHVDSSQ* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2786 414 Pfam Sodium/calcium exchanger protein 112 269 IPR004837 GO:0016021|GO:0055085
Gso8g2786 414 Pfam Sodium/calcium exchanger protein 305 391 IPR004837 GO:0016021|GO:0055085
Gso8g2786 414 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 384 413 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gso8g2786 414 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 29 383 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gso8g2786 414 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 29 383 - -
Gso8g2786 414 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 384 413 - -
Gso8g2786 414 TIGRFAM cax: calcium/proton exchanger 96 383 IPR004798 GO:0006816|GO:0015369
Gso8g2786 414 Gene3D - 290 409 IPR044880 -
Gso8g2786 414 Gene3D - 141 282 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2786 Gso-Chr8 45610528 45615939 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2786 32 414 Antiporters AT1G55730 63.033 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2786 K07300 - gmx:100799276 753.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2786 8 45610528 45615939 Gso8g2786 8 45610528 45615939 ECH
Gso18g0615 18 6723123 6728789 Gso8g2786 8 45610528 45615939 GST