Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2785 ATGTCATTCTCTATTGTGATTCACAATATGGGTTCATGGGTAAATGAACCACAATTGTATTATAAGGGGGGCGAGGTGCATGTAATTCATGGATTGGATGTTAGTAAATGGTCATATTTTGAAGCTATGAGGGTACTAACAGAACTAGGCTATAAGGGAGATGGTGATATGAAAATGTGGTGGAAAGGGCAGGGAACTGATTTTGATAGTTTAAGAGATTTTGTGTTGGATCAAGATGCTATGGACTTGGCCAATTATGCTCTAACTCACAACTGTGAAGTTGAGATATATGTTCAACATGGGGTGGGTGTTCTAGTTGAAAATGACAGTATATGTAAGATGATAGTTAATGGGGAGCAATGCCATAATGGTAGTTTGGAGCAATGTGGTAATGTTCAAGAATCTGGTAATTTGAACCAACTTGGTAATGTTAAGCAATCTGGTAATGTGGACCAATCTTCTGGTGGCGAAGATTTGGAGAAGTCAAATTTCAATGCCAGTGCAGAAGAAAGGGACTTAGGCATGGAAGATGGGTTTGATCTTCCTGAGGTTGGACATGTTAAGGCCACATTGAATAAGAAGGTGGATAAAATGAAGAACAAAGTTGAGGGGGTCACAAGGGGATATGGTACACGACAGAGAAAGAATAAAGATATTGCAAGGAGGGATAATGATCATAAAGTAAATGTGCCTGATGATGCTGACTCATTGTATAAGATGGAAAGTTCTTACTATAGTGACGAGTTGGATAGTGATATTGGTCAGGATGATGACATTGAAAGTCATGCAACGAAACATGTCACGTTTAAGAAGGAGGATATGCGTAACTTCATTAAGCAGAGTTTACTACTCAGCGAATATTCAATACAGATTGGTTCTCATAATGAAAGGCCAATGCATAAGTCTGATGATGAAGTTTCTTTTGGCTCTGAAATAATAAATTTTAACCAGCCAGAATCTATTGATCTGCTGGAAATACATGGTTCACATTATGGAGAATCTCGGACTGTCCATCATGAAACGATGGCGGGTATGATTTACAGGAGCATAAGGGTTGTGCTTTTGTCTAGCAAACTCAACTTGCTTATGCCTTTTGGGCCTCTTGCAATTCTTGTGCAGATATTGACTGGTCATCATGGTTGGATCTTTGGTCTAAGTTTGTTGGGAATAATGCCTATGGCAGAGCGGTTAGATTATGTAACCAAGAAGCTGACACTTTACACTGGCCATACAGTTGGGGTAGGGGGTATTTTAAATGCTTCATTTGGAAATGCAACGGAATTGATCATCTCACTATGTGCACTGAAAAGTGGAATGATACGGGCTGTCCAGCTATCTTTGCTGGGTTCAATTTTCTTCAATATGTTGCTGGTGCTTGGATGTGCATTCTTCAGAGGGGGGATTGTTTCTAATAAGAAGGAACAAGTGTTTAACAAGGAAATTGCTTCTGTAAACTCAGGATTATTGCTGATGGCAGTTATGGGCATACTTCTTCCTGCTGCTCTACACTACACACAGGCTGAGGTCCATGTTGGGGAGTCAGAGTTGTCACTTTCAAGATTCAGCAGCTGCATCATGCTTGTGGCCTACGTTGCATGCCTATTTTTCCAGTTTAAAAGTCAAAGAAGTCTCTATGTCCCTGTGAACGAGGGAGCATCTACTGCATGGGGAATTCCAGTAGCATTTATTAGTGTCATATTGCTTCCACTAGTGGGGAATGTCAGTGATATAATATTTTCCATGGAAGATAAACTCGACATTTCCTTAGGAGTAGCAATTGGGTCATCCACACAGATATCTATGTTTGTGATTCCATTTTGTGTTGTTATTGGTTGGATGATGGGGCAACCTATGGACTTAAACTTTCACCTTTTTGAGACTGCAGCACTATTTCTCACTGTTATAGTCGTAGCCATCATGTTACAGGAAGGAACTGCCAATTACTTCAAAGGACTACTGCTTATTCTTTGCTATCTGATAGTGGCTGCCAGTTTTTATGTACATTTAGATTCCTCTCAATAA 2022 0.3991 MSFSIVIHNMGSWVNEPQLYYKGGEVHVIHGLDVSKWSYFEAMRVLTELGYKGDGDMKMWWKGQGTDFDSLRDFVLDQDAMDLANYALTHNCEVEIYVQHGVGVLVENDSICKMIVNGEQCHNGSLEQCGNVQESGNLNQLGNVKQSGNVDQSSGGEDLEKSNFNASAEERDLGMEDGFDLPEVGHVKATLNKKVDKMKNKVEGVTRGYGTRQRKNKDIARRDNDHKVNVPDDADSLYKMESSYYSDELDSDIGQDDDIESHATKHVTFKKEDMRNFIKQSLLLSEYSIQIGSHNERPMHKSDDEVSFGSEIINFNQPESIDLLEIHGSHYGESRTVHHETMAGMIYRSIRVVLLSSKLNLLMPFGPLAILVQILTGHHGWIFGLSLLGIMPMAERLDYVTKKLTLYTGHTVGVGGILNASFGNATELIISLCALKSGMIRAVQLSLLGSIFFNMLLVLGCAFFRGGIVSNKKEQVFNKEIASVNSGLLLMAVMGILLPAALHYTQAEVHVGESELSLSRFSSCIMLVAYVACLFFQFKSQRSLYVPVNEGASTAWGIPVAFISVILLPLVGNVSDIIFSMEDKLDISLGVAIGSSTQISMFVIPFCVVIGWMMGQPMDLNFHLFETAALFLTVIVVAIMLQEGTANYFKGLLLILCYLIVAASFYVHLDSSQ* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2785 673 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 294 550 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gso8g2785 673 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 550 672 IPR004713 GO:0006812|GO:0008324|GO:0016021
Gso8g2785 673 Pfam Sodium/calcium exchanger protein 381 538 IPR004837 GO:0016021|GO:0055085
Gso8g2785 673 Pfam Sodium/calcium exchanger protein 552 664 IPR004837 GO:0016021|GO:0055085
Gso8g2785 673 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 294 550 - -
Gso8g2785 673 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 550 672 - -
Gso8g2785 673 MobiDBLite consensus disorder prediction 140 161 - -
Gso8g2785 673 MobiDBLite consensus disorder prediction 207 232 - -
Gso8g2785 673 Gene3D - 411 667 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2785 Gso-Chr8 45596656 45606463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2785 316 673 Antiporters AT1G55730 59.902 2.51e-155 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2785 K07300 - gmx:100799808 1312.75