Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g2782 ATGTCAATAAAAAACGAGCATTCATTCCGACTTGATTTTGCTTATGAAATAGGCCTCCAGAGATGTGGAAAGAGTTGCAGACTAAGGTGGACTAATTACCTTCGTCCTGATCTCAAACATGGCCAATTCTCGGATTCGGAAGAGCAAACCATTGTGAAACTTCATTCAGTTTTTGGTAACAGATGGTCACTGATAGCAGCCCAGCTGCCGGGACGCACTGACAATGATGTCAAAAACCACTGGAACACCAAGCTGAAGAAGAAACTGTCAGGCATGGGTATAGACCCTGTCACCCACAAGCCATTTTCCCATCTAATGGCTGAAATTGCTACAACATTGGCACCCCCACAAGCAGCTCACCTGGCTGAAGCAGCCCTTGGCTGTTTCAAAGATGAGGTGCTCCATCTTCTTACCAAGAAGCCAATTAACTTCCACCAGGGACAGCATTCCACTGCAGCACTGGGGAATAACTTCACAGATTACGTTAATTGTAAGCCAGATGAAAAGGACGCAACAGTTGAGAAGATTAAGTTTGACCTATCAAAGGCCATACAACATGATCCTGAAATAATGCCCGCAAACAAACCTTGGGACTCCAATGCAACTACATCTGCAAATTTTGCAATGCCATACGGTGTTTTCCCTACAATGTCTGGGTTTCAATTGTCTCCGGTATCTTTCAGCAAAGGGCATGCATCTCAATGGAGCCAAAGTGTATGTACTGGAAGCACATGCACAGCCATGGATCAGCAAATCCAATTACATGAAAAACTTGAAGCCGAAATTGGTGATGATTCTGAGGCTACGAAGGAAATTAGAAATCTATCCAATATATTCAGCTCCGATTGTGTGGTGTGGGATCTACCAGCAGATGATTTAATTAACCCCGTGGTATAA 897 0.4392 MSIKNEHSFRLDFAYEIGLQRCGKSCRLRWTNYLRPDLKHGQFSDSEEQTIVKLHSVFGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSGMGIDPVTHKPFSHLMAEIATTLAPPQAAHLAEAALGCFKDEVLHLLTKKPINFHQGQHSTAALGNNFTDYVNCKPDEKDATVEKIKFDLSKAIQHDPEIMPANKPWDSNATTSANFAMPYGVFPTMSGFQLSPVSFSKGHASQWSQSVCTGSTCTAMDQQIQLHEKLEAEIGDDSEATKEIRNLSNIFSSDCVVWDLPADDLINPVV* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g2782 298 CDD SANT 43 85 IPR001005 -
Gso8g2782 298 Gene3D - 8 39 - -
Gso8g2782 298 Gene3D - 41 101 - -
Gso8g2782 298 ProSiteProfiles Myb-like domain profile. 35 85 IPR001005 -
Gso8g2782 298 PANTHER TRANSCRIPTION FACTOR MYB80 17 298 - -
Gso8g2782 298 SUPERFAMILY Homeodomain-like 20 92 IPR009057 -
Gso8g2782 298 Pfam Myb-like DNA-binding domain 41 83 IPR001005 -
Gso8g2782 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 89 IPR017930 -
Gso8g2782 298 SMART sant 39 87 IPR001005 -
Gso8g2782 298 PANTHER F14D16.11-RELATED 17 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g2782 Gso-Chr8 45571726 45572784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g2782 18 298 MYB Transcription Factor Family AT5G56110 51.736 1.15e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso8g2782 Myb_DNA-binding 1.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g2782 K09422 - gmx:100800764 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso8g2782 8 45571726 45572784 Gso8g2782 8 45571726 45572784 ECH
Gso18g0611 18 6657884 6659033 Gso8g2782 8 45571726 45572784 GST